Cell-penetrating peptides and their clincal applications.

Cell-penetrating peptides (CPPs) are short peptides that facilitate cellular intake/uptake of various molecular equipment (from nanosize particles to small chemical molecules and large fragments of DNA). The "cargo" is associated with the peptides either through chemical linkage via covalent bonds or through non-covalent interactions. The function of the CPPs are to deliver the cargo into cells, a process that commonly occurs through endocytosis with the cargo delivered to delivery vectors for use in research and medicine.

CPPs typically have an amino acid composition that either contains a high relative abundance of positively charged amino acids such as lysine or arginine or has sequences that contain an alternating pattern of polar/charged amino acids and non-polar, hydrophobic amino acids. These two types of structures are referred to as polycationic or amphipathic, respectively. A third class of CPPs are the hydrophobic peptides, containing only apolar residues, with low net charge or have hydrophobic amino acid groups that are crucial for cellular uptake.

Table 1 provides a list of the most structurally and functionally characterized CPPs, the majority of which are currently in preclinical or clinical development.

CPP name Sequence Origin Class
HIV-1 TAT protein,TAT48-60 GRKKRRQRRRPPQ HIV-1 TAT protein Cationic
HIV-1 TAT protein,TAT49-57 RKKRRQRRR HIV-1 TAT protein Cationic
HIV-1 tat Protein (47-57) YGRKKRRQRRR HIV-1 TAT protein Cationic
Penetratin,pAntp(43-58) RQIKIWFQNRRMKWKK AntennapediaDrosophilamelanogaster Cationic
Polyarginines Rn Chemically synthesized Cationic
DPV1047 VKRGLKLRHVRPRVTRMDV Chemically synthesized Cationic
MPG GALFLGFLGAAGSTMGAWSQPKKKRKV HIV glycoprotein 41/ SV40 T antigen NLS Amphipathic
Pep-1 KETWWETWWTEWSQPKKKRKV Tryptophan-richcluster/SV40 T antigen NLS Amphipathic
pVEC LLIILRRRIRKQAHAHSK Vascular endothelial Cadherin Amphipathic
ARF(1-22) MVRRFLVTLRIRRACGPPRVRV p14ARF protein Amphipathic
BPrPr(1-28) MVKSKIGSWILVLFVAMWSDVGLCKKRP N terminus of unprocessed bovine prion protein Amphipathic
MAP KLALKLALKALKAALKLA Chemically synthesized Amphipathic
Transportan GWTLNSAGYLLGKINLKALAALAKKIL Chimeric galanin–Mastoparan Amphipathic
p28 LSTAADMQGVVTDGMASGLDKDYLKPDD Azurin Amphipathic
VT5 DPKGDPKGVTVTVTVTVTGKGDPKPD Chemically synthesized Amphipathic
Bac 7 (Bac 1-24) RRIRPRPPRLPRPRPRPLPFPRPG Bactenecin family of antimicrobial peptides Amphipathic
C105Y CSIPPEVKFNKPFVYLI a1-Antitrypsin Hydrophobic
PFVYLI PFVYLI Derived from synthetic C105Y Hydrophobic
Pep-7 SDLWEMMMVSLACQY CHL8 peptide phage Clone Hydrophobic

Cellular Uptake Mechanisms of CPPs

Although the mechanisms for cellular internalization of CPPs have been the subject of intense investigation, the pathways involved in this process have not been fully clarified. The difficulties encountered in the comprehension of the cellular uptake of these peptides are mostly ascribed to the differing physicochemical properties, size, and concentration of the diverse CPPs and/or CPP–cargo conjugates. These features can, indeed, have significant impact on the efficiency of cellular entry. Nonetheless, it has become clear that a single CPP can exploit different routes to enter the cell and that these routes may occasionally operate concomitantly, depending on the context of the experimental conditions. These entry routes are broadly divided into two groups: energy-independent direct penetration of the plasma membrane and energy dependent endocytosis. While direct translocation across the cell membrane occurs in some cases, mainly at high concentrations of the peptide, it is generally accepted that most CPPs and CPP–cargo conjugates enter cells by endocytosis.    

Fig.1. Schematic Representation of Proposed Mechanisms for Cell-Penetrating Peptide (CPP) Internalization. The diagram illustrates that the involved pathways can be divided into two groups: direct penetration of plasma membrane (yellow) and endocytic pathways (purple). The first type of process involves several energy independent models including membrane insertion of CPPs through pore formation and membrane destabilization through the carpet-like model or inverted micelle formation. Endocytic internalization of CPPs is an energy-dependent process that comprises macropinocytosis and endocytosis.

Clinical Applications of CPPs

The significant achievements in the preclinical evaluation of various CPP-derived peptide therapeutics, during the past decades, have revealed a remarkable potential for clinical application. Thus, several pharmaceutical companies have undertaken the clinical development of CPPs for local and systemic administration of various therapeutic molecules (Figure 2 and Table 2).

Fig. 2. Schematic Representation of Preclinical and Clinical Evaluations of Some Cell-Penetrating Peptide (CPP)-Derived Therapeutics. Numerous studies have been performed to investigate the therapeutic applications of various CPPs both in animal models of various diseases and in humans. Administration of CPP-derived therapeutics can be undertaken through relatively noninvasive administration routes, such as intravenous (i.v.), intraperitoneal (i.p.), intranasal, topical, intramuscular, per os, intracoronary, intratympanic, and subcutaneous.

Table 2. Examples of CPP-Conjugated Therapeutics Under Clinical Development

Pharmaceutical organization Compound CPP-cargo Therapeutic use
Auris Medical AM-111 TAT-JBD20(D-JNKI-1) Hearing loss
CellGate, Inc. PsorBan R7-cyclosporin A Psoriasis
Capstone Therapeutics AZX100 PTD4-HSP20Phosphopeptide Scar prevention/reduction
CDG Therapeutics, Inc. p28 p28 Cancer
KAI Pharmaceuticals KAI-9803 TAT–dPKC inhibitor Myocardial infarction
KAI-1678 TAT-ePKC inhibitor Pain: postherpeticneuralgia, spinal cordinjury, postoperative
RevanceTherapeutics, Inc. RT001 MTS-botulinumtoxin A Lateral canthal lines, Crow's feetFacial wrinkles
RT002 TransMTS1-botulinum toxin A Glabellar lines
Sarepta Therapeutics AVI-4658 N/A Duchenne muscularDystrophy
AVI-5126  (R-Ahx-R)4–PMO Cardiovascular diseaseCoronary artery bypass
Xigen SA XG-102 TAT-JBD20(D-JNKI-1) Inflammation
Intraocular inflammationand pain

Souce: https://doi.org/10.1016/j.tips.2017.01.003    2018-05-15