pCPCbLCVB.002 vector (V008226)

Basic Vector Information

Vector Name:
pCPCbLCVB.002
Antibiotic Resistance:
Ampicillin
Length:
6854 bp
Type:
Gene silencing vector
Replication origin:
ori
Source/Author:
Turnage MA, Muangsan N, Peele CG, Robertson D.

pCPCbLCVB.002 vector Vector Map

pCPCbLCVB.0026854 bp3006009001200150018002100240027003000330036003900420045004800510054005700600063006600AmpRAmpR promoterf1 oriM13 fwdT7 promoterKS primerNuclear shuttle proteinSK primerT3 promoterM13 revlac operatorlac promoterCAP binding siteori

pCPCbLCVB.002 vector Sequence

Copy Sequence

Download GeneBank File(.gb)

LOCUS       V008226                 6854 bp    DNA     circular SYN 17-DEC-2018
DEFINITION  Exported.
ACCESSION   V008226
VERSION     V008226
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
            .
REFERENCE   1  (bases 1 to 6854)
  AUTHORS   Turnage MA, Muangsan N, Peele CG, Robertson D.
  TITLE     Geminivirus-based vectors for gene silencing in Arabidopsis
  JOURNAL   Plant J. 30 (1), 107-114 (2002)
   PUBMED   11967097
REFERENCE   2  (bases 1 to 6854)
  AUTHORS   Robertson D, Peele CG.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-APR-2003) Botany, North Carolina State University, Box
            7612, Raleigh, NC 27695, USA
REFERENCE   3  (bases 1 to 6854)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 6854)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Plant J.";
            date: "2002"; volume: "30"; issue: "1"; pages: "107-114"
            SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
            (18-APR-2003) Botany, North Carolina State University, Box 7612,
            Raleigh, NC 27695, USA"
            SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..6854
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     CDS             complement(1..858)
                     /label="AmpR"
                     /note="beta-lactamase"
     promoter        complement(859..963)
                     /label="AmpR promoter"
     rep_origin      complement(989..1444)
                     /direction=LEFT
                     /label="f1 ori"
                     /note="f1 bacteriophage origin of replication; arrow
                     indicates direction of (+) strand synthesis"
     primer_bind     1586..1602
                     /label="M13 fwd"
                     /note="common sequencing primer, one of multiple similar
                     variants"
     promoter        1612..1630
                     /label="T7 promoter"
                     /note="promoter for bacteriophage T7 RNA polymerase"
     primer_bind     1656..1672
                     /label="KS primer"
                     /note="common sequencing primer, one of multiple similar
                     variants"
     CDS             2492..3259
                     /note="Nuclear shuttle protein from Cabbage leaf curl virus
                     (isolate Jamaica). Accession#: Q96706"
                     /label="Nuclear shuttle protein"
     primer_bind     complement(5599..5615)
                     /label="SK primer"
                     /note="common sequencing primer, one of multiple similar
                     variants"
     promoter        complement(5652..5670)
                     /label="T3 promoter"
                     /note="promoter for bacteriophage T3 RNA polymerase"
     primer_bind     complement(5691..5707)
                     /label="M13 rev"
                     /note="common sequencing primer, one of multiple similar
                     variants"
     protein_bind    complement(5715..5731)
                     /label="lac operator"
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be
                     relieved by adding lactose or
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     promoter        complement(5739..5769)
                     /label="lac promoter"
                     /note="promoter for the E. coli lac operon"
     protein_bind    complement(5784..5805)
                     /label="CAP binding site"
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     rep_origin      complement(6093..6681)
                     /direction=LEFT
                     /label="ori"
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
                     replication"

This page is informational only.