Basic Vector Information
- Vector Name:
- pCPCbLCVB.002
- Antibiotic Resistance:
- Ampicillin
- Length:
- 6854 bp
- Type:
- Gene silencing vector
- Replication origin:
- ori
- Source/Author:
- Turnage MA, Muangsan N, Peele CG, Robertson D.
pCPCbLCVB.002 vector Map
pCPCbLCVB.002 vector Sequence
LOCUS V008226 6854 bp DNA circular SYN 17-DEC-2018
DEFINITION Exported.
ACCESSION V008226
VERSION V008226
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 6854)
AUTHORS Turnage MA, Muangsan N, Peele CG, Robertson D.
TITLE Geminivirus-based vectors for gene silencing in Arabidopsis
JOURNAL Plant J. 30 (1), 107-114 (2002)
PUBMED 11967097
REFERENCE 2 (bases 1 to 6854)
AUTHORS Robertson D, Peele CG.
TITLE Direct Submission
JOURNAL Submitted (18-APR-2003) Botany, North Carolina State University, Box
7612, Raleigh, NC 27695, USA
REFERENCE 3 (bases 1 to 6854)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 6854)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Plant J.";
date: "2002"; volume: "30"; issue: "1"; pages: "107-114"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(18-APR-2003) Botany, North Carolina State University, Box 7612,
Raleigh, NC 27695, USA"
SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..6854
/mol_type="other DNA"
/organism="synthetic DNA construct"
CDS complement(1..858)
/label="AmpR"
/note="beta-lactamase"
promoter complement(859..963)
/label="AmpR promoter"
rep_origin complement(989..1444)
/direction=LEFT
/label="f1 ori"
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 1586..1602
/label="M13 fwd"
/note="common sequencing primer, one of multiple similar
variants"
promoter 1612..1630
/label="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind 1656..1672
/label="KS primer"
/note="common sequencing primer, one of multiple similar
variants"
CDS 2492..3259
/note="Nuclear shuttle protein from Cabbage leaf curl virus
(isolate Jamaica). Accession#: Q96706"
/label="Nuclear shuttle protein"
primer_bind complement(5599..5615)
/label="SK primer"
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(5652..5670)
/label="T3 promoter"
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(5691..5707)
/label="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
protein_bind complement(5715..5731)
/label="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(5739..5769)
/label="lac promoter"
/note="promoter for the E. coli lac operon"
protein_bind complement(5784..5805)
/label="CAP binding site"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(6093..6681)
/direction=LEFT
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
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