Basic Vector Information
- Vector Name:
- pCN56
- Antibiotic Resistance:
- Ampicillin
- Length:
- 6592 bp
- Type:
- Staphylococcal shuttle vector
- Replication origin:
- ori
- Source/Author:
- Riojas MA, Bojja K, Byrd R, Hamid S, Mooney S, Monaco A, Alalade R, King S, Hazbon MH.
pCN56 vector Map
pCN56 vector Sequence
LOCUS V008331 6592 bp DNA circular SYN 17-DEC-2018
DEFINITION Exported.
ACCESSION V008331
VERSION V008331
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 6592)
AUTHORS Riojas MA, Bojja K, Byrd R, Hamid S, Mooney S, Monaco A, Alalade R,
King S, Hazbon MH.
TITLE Sequencing of a set of cassette-based shuttle vectors for
Gram-positive bacteria deposited at BEI resources from the NARSA
collection
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6592)
AUTHORS Riojas MA, Bojja K, Byrd R, Hamid S, Mooney S, Monaco A, Alalade R,
King S, Hazbon MH.
TITLE Direct Submission
JOURNAL Submitted (14-MAY-2015) BEI Bacteriology, BEI Resources/American
Type and Culture Collection (ATCC), 10801 University Boulevard,
Manassas, VA 20110-2209, USA
REFERENCE 3 (bases 1 to 6592)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 6592)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Assembly Method :: CLC Genomics Workbench v. 7.0.2
Coverage :: 38389
Sequencing Technology :: Illumina
##Assembly-Data-END##
SGRef: number: 1; type: "Journal Article"; journalName:
"Unpublished"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(14-MAY-2015) BEI Bacteriology, BEI Resources/American Type and
Culture Collection (ATCC), 10801 University Boulevard, Manassas, VA
20110-2209, USA"
SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..6592
/mol_type="other DNA"
/organism="synthetic DNA construct"
misc_feature 1..2087
/note="T181cop-623 repC; Staphylococcus replication
cassette; high-copy-number variant; derived from J04764"
misc_feature 158..391
/label="RS-B site"
/note="RS-B site"
rep_origin 654..821
/note="ori; derived from Staphylococcus aureus"
CDS 686..1630
/codon_start=1
/product="RepC protein"
/label="RepC protein"
/note="polypeptide A"
/protein_id="AMR43698.1"
/translation="MYKNNHANHSNHLENHDLDNFSKTGYSNSRLDAHTVCISDPKLSF
DAMTIVGNLNRDNAQALSKFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADSWD
RRNMRIEFNPNKLTRDEMIWLKQNIISYMEDDGFTRLDLAFDFEDDLSDYYAMSDKAVK
KTIFYGRNGKPETKYFGVRDSNRFIRIYNKKQERKDNADAEVMSEHLWRVEIELKRDMV
DYWNDCFSDLHILQPDWKTIQRTADRAIVFMLLSDEEEWGKLHRNSRTKYKNLIKEISP
VDLTDLMKSTLKANEKQLQKQIDFWQHEFKFWK"
variation 1130..1132
/label="E149D"
/note="E149D"
misc_feature 1792..2087
/label="truncated polypeptide B"
/note="truncated polypeptide B"
misc_feature 2406..2465
/label="leader peptide"
/note="leader peptide"
CDS 2525..3256
/gene="ermC"
/label="rRNA adenine N-6-methyltransferase"
/note="rRNA adenine N-6-methyltransferase from
Staphylococcus aureus. Accession#: P02979"
promoter 3624..3728
/label="AmpR promoter"
CDS 3729..4586
/label="AmpR"
/note="beta-lactamase"
rep_origin 4760..5348
/direction=RIGHT
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature 5485..5529
/note="polylinker; derived from M13mp19"
CDS 5563..6276
/label="yeGFP"
/note="yeast-enhanced green fluorescent protein"
misc_feature 6288..6588
/label="blaZTT"
/note="blaZTT"
misc_feature 6451..6588
/label="TT"
/note="TT"
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