pScaf-7560.2 vector (V003433)

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LOCUS       V003433                10315 bp    DNA     circular SYN 18-DEC-2018
DEFINITION  Exported.
ACCESSION   V003433
VERSION     V003433
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
            .
REFERENCE   1  (bases 1 to 10315)
  AUTHORS   Nafisi PM, Aksel T, Douglas SM.
  TITLE     Construction of a novel phagemid to produce custom DNA origami
            scaffolds
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10315)
  AUTHORS   Nafisi PM, Aksel T, Douglas SM.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAY-2018) Cellular and Molecular Pharmacology,
            University of California, San Francisco, 600 16th Street, Genentech
            Hall S-474, San Francisco, CA 94158, USA
REFERENCE   3  (bases 1 to 10315)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 10315)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName:
            "Unpublished"
            SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
            (06-MAY-2018) Cellular and Molecular Pharmacology, University of
            California, San Francisco, 600 16th Street, Genentech Hall S-474,
            San Francisco, CA 94158, USA"
            SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..10315
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     rep_origin      44..424
                     /label="M13 ori"
                     /note="M13 bacteriophage origin of replication; arrow
                     indicates direction of (+) strand synthesis"
     CDS             complement(2611..3207)
                     /gene="K"
                     /label="Tail tip assembly protein K"
                     /note="Tail tip assembly protein K from Escherichia phage
                     lambda. Accession#: P03729"
     CDS             complement(3359..4054)
                     /gene="L"
                     /label="Tail tip protein L"
                     /note="Tail tip protein L from Escherichia phage lambda.
                     Accession#: P03738"
     CDS             complement(4383..6941)
                     /gene="H"
                     /label="Tape measure protein"
                     /note="Tape measure protein from Escherichia phage lambda.
                     Accession#: P03736"
     rep_origin      7604..7933
                     /note="M13term; M13 origin modified with 3-base mutation to
                     eliminate initation capabilities, resulting in M13
                     terminator"
     misc_feature    7884..7888
                     /label="term-alpha"
                     /note="term-alpha"
     misc_feature    7902..7906
                     /label="term-beta"
                     /note="term-beta"
     misc_feature    7911..7916
                     /label="term-gamma"
                     /note="term-gamma"
     misc_feature    7920..7925
                     /note="term-delta-T3; TGGAAC mutated to TGGTTT"
     primer_bind     complement(7949..7965)
                     /label="M13 rev"
                     /note="common sequencing primer, one of multiple similar
                     variants"
     protein_bind    7973..7989
                     /label="lac operator"
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be
                     relieved by adding lactose or
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     promoter        complement(7997..8027)
                     /label="lac promoter"
                     /note="promoter for the E. coli lac operon"
     protein_bind    complement(8042..8063)
                     /label="CAP binding site"
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     rep_origin      complement(8351..8939)
                     /direction=LEFT
                     /label="ori"
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
                     replication"
     CDS             complement(9113..9970)
                     /label="AmpR"
                     /note="beta-lactamase"
     promoter        complement(9971..10075)
                     /label="AmpR promoter"