pTha-K1 vector (V002717)

Basic Vector Information

Vector Name:
pTha-K1
Antibiotic Resistance:
Ampicillin
Length:
6461 bp
Type:
Shuttle vector
Replication origin:
ori
Source/Author:
Tanaka R, Kikutani S, Mahardika A, Matsuda Y.

pTha-K1 vector Map

pTha-K16461 bp300600900120015001800210024002700300033003600390042004500480051005400570060006300T7 promoterTpfcp8NrsRTpfcp8Tpfcp8multiple cloning siteTpfcp8M13 fwdf1 oriAmpR promoterAmpRoriCAP binding sitelac promoterlac operator

pTha-K1 vector Sequence

LOCUS       40924_43238        6461 bp DNA     circular SYN 18-DEC-2018
DEFINITION  Shuttle vector pTha-K1 DNA, complete sequence.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 6461)
  AUTHORS   Tanaka R, Kikutani S, Mahardika A, Matsuda Y.
  TITLE     Localization of enzymes relating to C4 organic acid metabolisms in 
            the marine diatom, Thalassiosira pseudonana
  JOURNAL   Photosyn. Res. 121 (2-3), 251-263 (2014)
  PUBMED    24414292
REFERENCE   2  (bases 1 to 6461)
  AUTHORS   Kikutani S, Matsuda Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-AUG-2013) Contact:Sae Kikutani Kwansei Gakuin 
            University, Department of Bioscience; 2-1 Gakuen, Sanda, Hyogo 
            669-1337, Japan
REFERENCE   3  (bases 1 to 6461)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 6461)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Photosyn. 
            Res. 121 (2-3), 251-263 (2014)"
COMMENT     SGRef: number: 2; type: "Journal Article"; journalName: "Submitted 
            (30-AUG-2013) Contact:Sae Kikutani Kwansei Gakuin University, 
            Department of Bioscience; 2-1 Gakuen, Sanda, Hyogo 669-1337, Japan"
COMMENT     SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..6461
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     promoter        24..42
                     /label=T7 promoter
                     /note="promoter for bacteriophage T7 RNA polymerase"
     regulatory      58..1023
                     /label=Tpfcp8
                     /note="Tpfcp8"
                     /regulatory_class="promoter"
     CDS             1024..1590
                     /label=NrsR
                     /note="nourseothricin acetyltransferase"
     regulatory      1594..2096
                     /label=Tpfcp8
                     /note="Tpfcp8"
                     /regulatory_class="terminator"
     regulatory      2131..3145
                     /label=Tpfcp8
                     /note="Tpfcp8"
                     /regulatory_class="promoter"
     misc_feature    3146..3165
                     /label=multiple cloning site
                     /note="multiple cloning site"
     regulatory      3166..3668
                     /label=Tpfcp8
                     /note="Tpfcp8"
                     /regulatory_class="terminator"
     primer_bind     complement(3700..3716)
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     rep_origin      complement(3858..4313)
                     /direction=LEFT
                     /label=f1 ori
                     /note="f1 bacteriophage origin of replication; arrow
                     indicates direction of (+) strand synthesis"
     promoter        4340..4444
                     /label=AmpR promoter
     CDS             4445..5302
                     /label=AmpR
                     /note="beta-lactamase"
     rep_origin      5476..6064
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     protein_bind    6352..6373
                     /label=CAP binding site
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     promoter        6388..6418
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    6426..6442
                     /label=lac operator
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."

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