Basic Vector Information
- Vector Name:
- pST-KnarK2
- Antibiotic Resistance:
- Kanamycin
- Length:
- 4567 bp
- Type:
- Hypoxia inducible shuttle vector
- Replication origin:
- ori
- Source/Author:
- Parikh A, Kumar D, Chawla Y, Kurthkoti K, Khan S, Varshney U, Nandicoori VK.
pST-KnarK2 vector Map
pST-KnarK2 vector Sequence
LOCUS 40924_41295 4567 bp DNA circular SYN 18-DEC-2018
DEFINITION Hypoxia inducible shuttle vector pST-KnarK2, complete sequence.
ACCESSION .
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4567)
AUTHORS Parikh A, Kumar D, Chawla Y, Kurthkoti K, Khan S, Varshney U,
Nandicoori VK.
TITLE Development of a new generation of vectors for gene expression, gene
replacement, and protein-protein interaction studies in mycobacteria
JOURNAL Appl. Environ. Microbiol. 79 (5), 1718-1729 (2013)
PUBMED 23315736
REFERENCE 2 (bases 1 to 4567)
AUTHORS Parikh A, Kumar D, Chawla Y, Kurthkoti K, Khan S, Varshney U,
Nandicoori VK.
TITLE Direct Submission
JOURNAL Submitted (11-NOV-2012) Signal Transduction Lab-I, National
Institute of Immunology, Aruna Asaf Ali Marg, New Delhi, Delhi
110067, India
REFERENCE 3 (bases 1 to 4567)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 4567)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Appl.
Environ. Microbiol."; date: "2013"; volume: "79"; issue: "5"; pages:
"1718-1729"
COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(11-NOV-2012) Signal Transduction Lab-I, National Institute of
Immunology, Aruna Asaf Ali Marg, New Delhi, Delhi 110067, India"
COMMENT SGRef: number: 3; type: "Journal Article"
COMMENT ##Assembly-Data-START##
Assembly Method :: ClustalW v. 2.1
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4567
/mol_type="other DNA"
/organism="synthetic DNA construct"
regulatory 7..310
/label=NarK2
/note="NarK2"
/regulatory_class="promoter"
misc_feature 317..323
/label=SD sequence
/note="SD sequence"
CDS 337..354
/label=6xHis
/note="6xHis affinity tag"
CDS 427..450
/label=FLAG
/note="FLAG(R) epitope tag, followed by an enterokinase
cleavage site"
terminator 469..511
/gene="Escherichia coli rrnB"
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
terminator 540..586
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
CDS 747..1559
/label=KanR
/note="aminoglycoside phosphotransferase"
rep_origin 1894..2482
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
rep_origin 2649..4542
/label=oriM
/note="oriM"
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