pST-KnarK2 vector (V003039)

Basic Vector Information

Vector Name:
pST-KnarK2
Antibiotic Resistance:
Kanamycin
Length:
4567 bp
Type:
Hypoxia inducible shuttle vector
Replication origin:
ori
Source/Author:
Parikh A, Kumar D, Chawla Y, Kurthkoti K, Khan S, Varshney U, Nandicoori VK.

pST-KnarK2 vector Map

pST-KnarK24567 bp600120018002400300036004200NarK2SD sequence6xHisFLAGrrnB T1 terminatorrrnB T1 terminatorKanRorioriM

pST-KnarK2 vector Sequence

LOCUS       40924_41295        4567 bp DNA     circular SYN 18-DEC-2018
DEFINITION  Hypoxia inducible shuttle vector pST-KnarK2, complete sequence.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 4567)
  AUTHORS   Parikh A, Kumar D, Chawla Y, Kurthkoti K, Khan S, Varshney U, 
            Nandicoori VK.
  TITLE     Development of a new generation of vectors for gene expression, gene
            replacement, and protein-protein interaction studies in mycobacteria
  JOURNAL   Appl. Environ. Microbiol. 79 (5), 1718-1729 (2013)
  PUBMED    23315736
REFERENCE   2  (bases 1 to 4567)
  AUTHORS   Parikh A, Kumar D, Chawla Y, Kurthkoti K, Khan S, Varshney U, 
            Nandicoori VK.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-NOV-2012) Signal Transduction Lab-I, National 
            Institute of Immunology, Aruna Asaf Ali Marg, New Delhi, Delhi 
            110067, India
REFERENCE   3  (bases 1 to 4567)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 4567)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Appl. 
            Environ. Microbiol."; date: "2013"; volume: "79"; issue: "5"; pages:
            "1718-1729"
COMMENT     SGRef: number: 2; type: "Journal Article"; journalName: "Submitted 
            (11-NOV-2012) Signal Transduction Lab-I, National Institute of 
            Immunology, Aruna Asaf Ali Marg, New Delhi, Delhi 110067, India"
COMMENT     SGRef: number: 3; type: "Journal Article"
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: ClustalW v. 2.1
            Sequencing Technology :: Sanger dideoxy sequencing 
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..4567
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     regulatory      7..310
                     /label=NarK2
                     /note="NarK2"
                     /regulatory_class="promoter"
     misc_feature    317..323
                     /label=SD sequence
                     /note="SD sequence"
     CDS             337..354
                     /label=6xHis
                     /note="6xHis affinity tag"
     CDS             427..450
                     /label=FLAG
                     /note="FLAG(R) epitope tag, followed by an enterokinase
                     cleavage site"
     terminator      469..511
                     /gene="Escherichia coli rrnB"
                     /label=rrnB T1 terminator
                     /note="transcription terminator T1 from the E. coli rrnB
                     gene"
     terminator      540..586
                     /label=rrnB T1 terminator
                     /note="transcription terminator T1 from the E. coli rrnB
                     gene"
     CDS             747..1559
                     /label=KanR
                     /note="aminoglycoside phosphotransferase"
     rep_origin      1894..2482
                     /direction=RIGHT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     rep_origin      2649..4542
                     /label=oriM
                     /note="oriM"

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