pST-KI vector (V003041)

Basic Vector Information

Vector Name:
pST-KI
Antibiotic Resistance:
Kanamycin
Length:
4171 bp
Type:
Integrative constitutive shuttle vector
Replication origin:
ori
Source/Author:
Parikh A, Kumar D, Chawla Y, Kurthkoti K, Khan S, Varshney U, Nandicoori VK.

pST-KI vector Map

pST-KI4171 bp60012001800240030003600Pmyc1tetO; UV15 promoter with tetOSD sequence6xHisFLAGrrnB T1 terminatorrrnB T1 terminatorKanRoriIntegrase

pST-KI vector Sequence

LOCUS       V003041                 4171 bp    DNA     circular SYN 18-DEC-2018
DEFINITION  Exported.
ACCESSION   V003041
VERSION     V003041
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
            .
REFERENCE   1  (bases 1 to 4171)
  AUTHORS   Parikh A, Kumar D, Chawla Y, Kurthkoti K, Khan S, Varshney U,
            Nandicoori VK.
  TITLE     Development of a new generation of vectors for gene expression, gene
            replacement, and protein-protein interaction studies in mycobacteria
  JOURNAL   Appl. Environ. Microbiol. 79 (5), 1718-1729 (2013)
   PUBMED   23315736
REFERENCE   2  (bases 1 to 4171)
  AUTHORS   Parikh A, Kumar D, Chawla Y, Kurthkoti K, Khan S, Varshney U,
            Nandicoori VK.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-NOV-2012) Signal Transduction Lab-I, National
            Institute of Immunology, Aruna Asaf Ali Marg, New Delhi, Delhi
            110067, India
REFERENCE   3  (bases 1 to 4171)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 4171)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: ClustalW v. 2.1
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
            SGRef: number: 1; type: "Journal Article"; journalName: "Appl.
            Environ. Microbiol."; date: "2013"; volume: "79"; issue: "5"; pages:
            "1718-1729"
            SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
            (11-NOV-2012) Signal Transduction Lab-I, National Institute of
            Immunology, Aruna Asaf Ali Marg, New Delhi, Delhi 110067, India"
            SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..4171
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     regulatory      7..308
                     /note="Pmyc1tetO; UV15 promoter with tetO"
                     /regulatory_class="promoter"
     protein_bind    179..196
                     /gene="tetO"
                     /label="tet operator"
                     /bound_moiety="tetracycline repressor TetR"
                     /note="bacterial operator O2 for the tetR and tetA genes"
     misc_feature    315..321
                     /label="SD sequence"
                     /note="SD sequence"
     CDS             335..352
                     /label="6xHis"
                     /note="6xHis affinity tag"
     CDS             425..448
                     /label="FLAG"
                     /note="FLAG(R) epitope tag, followed by an enterokinase
                     cleavage site"
     terminator      467..509
                     /gene="Escherichia coli rrnB"
                     /label="rrnB T1 terminator"
                     /note="transcription terminator T1 from the E. coli rrnB
                     gene"
     terminator      538..584
                     /label="rrnB T1 terminator"
                     /note="transcription terminator T1 from the E. coli rrnB
                     gene"
     CDS             745..1557
                     /label="KanR"
                     /note="aminoglycoside phosphotransferase"
     rep_origin      1892..2480
                     /direction=RIGHT
                     /label="ori"
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
                     replication"
     CDS             2958..4070
                     /gene="33"
                     /label="Integrase"
                     /note="Integrase from Mycobacterium phage L5. Accession#:
                     P22884"

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