pSolycp00005 vector (V003120)

LOCUS       40924_40817       11811 bp DNA     circular SYN 18-DEC-2018
DEFINITION  Cloning vector pSolycp00005 DNA, complete sequence.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 11811)
  AUTHORS   Aoki K, Kurabayashi A, Suda K, Odahara M, Goto DB, Shibata D.
  TITLE     5'-flanking region of Solyc08g080670 fused to SlHTA6-EYFP
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 11811)
  AUTHORS   Aoki K, Kurabayashi A, Suda K, Odahara M, Goto DB, Shibata D.
  TITLE     Tomato HTA6 fused to EYFP driven by 35S omega promoter
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 11811)
  AUTHORS   Aoki K, Kurabayashi A, Suda K, Odahara M, Goto D, Shibata D.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2011) Contact:Koh Aoki Osaka Prefecture 
            University, Department of Life and Environmental Sciences; Naka-ku, 
            Gakuen-cho, 1-1, Sakai, Osaka 599-8531, Japan E-mail 
            :kaoki@plant.osakafu-u.ac.jp Phone :81-72-254-9421 Fax 
            :81-72-254-9918
REFERENCE   4  (bases 1 to 11811)
  TITLE     Direct Submission
REFERENCE   5  (bases 1 to 11811)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: 
            "Unpublished"
COMMENT     SGRef: number: 2; type: "Journal Article"; journalName: 
            "Unpublished"
COMMENT     SGRef: number: 3; type: "Journal Article"; journalName: "Submitted 
            (24-NOV-2011) Contact:Koh Aoki Osaka Prefecture University, 
            Department of Life and Environmental Sciences"; volume: " Naka-ku, 
            Gakuen-cho, 1-1, Sakai, Osaka 599-8531, Japan E-mail 
            :kaoki@plant.osakafu-u.ac.jp Phone :81-72-254-9421 Fax "; pages: 
            "81-72-254-991"
COMMENT     SGRef: number: 4; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..11811
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     misc_feature    complement(21..45)
                     /label=RB T-DNA repeat
                     /note="right border repeat from nopaline C58 T-DNA"
     primer_bind     248..264
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     protein_bind    345..369
                     /label=attB1
                     /note="recombination site for the Gateway(R) BP reaction"
     regulatory      390..1888
                     /note="tomato promoter, BLAST search(vs SL2.40.fasta) 
                     result/SL2.40ch08:61059375..61057876"
                     /regulatory_class="promoter"
     protein_bind    complement(1905..1929)
                     /label=attB2
                     /note="recombination site for the Gateway(R) BP reaction"
     misc_feature    1954..2391
                     /gene="SlHTA6"
                     /note="The nucleotide sequence is identical to GenBank 
                     JN790634.1.; putative histone 2A protein"
     gene            1954..2391
                     /gene="SlHTA6"
                     /label=SlHTA6
     CDS             2398..3114
                     /label=EYFP
                     /note="enhanced YFP"
     terminator      3134..3381
                     /label=NOS terminator
                     /note="nopaline synthase terminator and poly(A) signal"
     primer_bind     complement(3403..3419)
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     protein_bind    3427..3443
                     /label=lac operator
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     promoter        complement(3451..3481)
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    complement(3496..3517)
                     /label=CAP binding site
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     promoter        3708..4385
                     /label=CaMV 35S promoter (enhanced)
                     /note="cauliflower mosaic virus 35S promoter with a
                     duplicated enhancer region"
     CDS             4454..5242
                     /label=NeoR/KanR
                     /note="aminoglycoside phosphotransferase"
     polyA_signal    5302..5476
                     /label=CaMV poly(A) signal
                     /note="cauliflower mosaic virus polyadenylation signal"
     misc_feature    complement(5554..5578)
                     /label=LB T-DNA repeat
                     /note="left border repeat from nopaline C58 T-DNA"
     CDS             6003..6794
                     /label=KanR
                     /note="aminoglycoside phosphotransferase"
     rep_origin      6884..7472
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     misc_feature    complement(7658..7798)
                     /label=bom
                     /note="basis of mobility region from pBR322"
     rep_origin      complement(8142..8336)
                     /direction=LEFT
                     /label=pVS1 oriV
                     /note="origin of replication for the Pseudomonas plasmid
                     pVS1 (Heeb et al., 2000)"
     CDS             complement(8405..9469)
                     /label=pVS1 RepA
                     /note="replication protein from the Pseudomonas plasmid
                     pVS1 (Heeb et al., 2000)"
     CDS             complement(9906..10532)
                     /label=pVS1 StaA
                     /note="stability protein from the Pseudomonas plasmid pVS1
                     (Heeb et al., 2000)"