Basic Vector Information
- Vector Name:
- pMTL82254
- Length:
- 5935 bp
- Type:
- Shuttle vector
- Replication origin:
- ori
- Source/Author:
- Heap JT, Pennington OJ, Cartman ST, Minton NP.
pMTL82254 vector Vector Map
pMTL82254 vector Sequence
LOCUS V004417 5935 bp DNA circular SYN 18-DEC-2018 DEFINITION Exported. ACCESSION V004417 VERSION V004417 KEYWORDS . SOURCE synthetic DNA construct ORGANISM synthetic DNA construct . REFERENCE 1 (bases 1 to 5935) AUTHORS Heap JT, Pennington OJ, Cartman ST, Minton NP. TITLE A modular system for Clostridium shuttle plasmids JOURNAL J. Microbiol. Methods 78 (1), 79-85 (2009) PUBMED 19445976 REFERENCE 2 (bases 1 to 5935) AUTHORS Pennington OJ, Heap JT, Cartman ST, Minton NP. TITLE Direct Submission JOURNAL Submitted (02-MAR-2009) Centre for Biomolecular Sciences, The University of Nottingham, University Park, Nottingham NG7 2RD, United Kingdom REFERENCE 3 (bases 1 to 5935) TITLE Direct Submission REFERENCE 4 (bases 1 to 5935) AUTHORS . TITLE Direct Submission COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "J. Microbiol. Methods"; date: "2009"; volume: "78"; issue: "1"; pages: "79-85" SGRef: number: 2; type: "Journal Article"; journalName: "Submitted (02-MAR-2009) Centre for Biomolecular Sciences, The University of Nottingham, University Park, Nottingham NG7 2RD, United Kingdom" SGRef: number: 3; type: "Journal Article" FEATURES Location/Qualifiers source 1..5935 /mol_type="other DNA" /organism="synthetic DNA construct" regulatory 9..62 /note="terminator derived from CD0164 gene of Clostridium difficile" /regulatory_class="terminator" primer_bind 63..79 /label="M13 rev" /note="common sequencing primer, one of multiple similar variants" CDS 98..718 /gene="catP" /label="Chloramphenicol acetyltransferase" /note="Chloramphenicol acetyltransferase from Clostridium perfringens. Accession#: P26826" primer_bind complement(767..783) /label="M13 fwd" /note="common sequencing primer, one of multiple similar variants" regulatory 931..972 /note="terminator derived from fdx gene of Clostridium pasteurianum" /regulatory_class="terminator" CDS 1493..2548 /codon_start=1 /gene="repA" /product="plasmid replication protein" /label="repA" /protein_id="ACR43890.1" /translation="MTNYNQKNENKQEVKTALEKCTDKKRKNPRFTSYIAPLTTKKNIE RTSTCGDYLFMLSDADLEHFKLHKGNFCGNRFCPMCSWRLACKDSLEISILMEHLRKEE NKEFIFLTLTTPNVKSYDLNYSIKQYNKSFKKLMERKEVKDITKGYIRKLEVTYQKEKY ITKDLWKIKKDYYQKKGLEIGDLEPNFDTYNPHFHVVIAVNKSYFTDKNYYINRERWLE LWKFATKDDSITQVDVRKAKINDYKEVYELAKYSAKDTDYLISRPVFEIFYKALKGKQV LVFSGFFKDAHKLYKQGKLDVYKKKDEIKYVYIVYYNWCKKQYEKTRIRELTEDEKEEL NQDLIDEIEID" gene 1493..2548 /gene="repA" /label="repA" CDS complement(2639..3142) /codon_start=1 /product="putative plasmid replication protein" /label="putative plasmid replication protein" /note="orf2" /protein_id="ACR43893.1" /translation="MKFKKIILYIFIVIIPLSITGCSINQITTPVPKNYLDNIVKKYVG PEGVQPSFGGKTFYDYKIIDSEKSKNIIKIYLYYIGQEYYIEDDKLVEGTGSASFATVT IKKENNNYKLVSYEVPKSPAQEDTVKIFPKSVRKKAIHANTPSLKNIEKEAETYFKKEL KTKN" CDS 3488..4222 /gene="ermBP" /label="rRNA adenine N-6-methyltransferase" /note="rRNA adenine N-6-methyltransferase from Enterococcus faecalis. Accession#: P0A4D5" rep_origin 4379..4967 /direction=RIGHT /label="ori" /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" oriT 5288..5397 /label="oriT" /note="incP origin of transfer" CDS 5430..5798 /label="traJ" /note="oriT-recognizing protein"
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