pPlat-Pds-Mod4.1 vector (V004037)

Basic Vector Information

Vector Name:
pPlat-Pds-Mod4.1
Antibiotic Resistance:
Ampicillin
Length:
8742 bp
Type:
Cloning vector
Replication origin:
ori
Source/Author:
Steinbrenner J, Sandmann G.

pPlat-Pds-Mod4.1 vector Map

pPlat-Pds-Mod4.18742 bp4008001200160020002400280032003600400044004800520056006000640068007200760080008400pdsMod4.1M13 fwdT7 promoterMCST3 promoterM13 revlac operatorlac promoterCAP binding siteoriAmpRAmpR promoter

pPlat-Pds-Mod4.1 vector Sequence

LOCUS       40924_34924        8742 bp DNA     circular SYN 18-DEC-2018
DEFINITION  Cloning vector pPlat-Pds-Mod4.1, complete sequence.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 8742)
  AUTHORS   Steinbrenner J, Sandmann G.
  TITLE     Transformation of the green alga Haematococcus pluvialis with a 
            phytoene desaturase for accelerated astaxanthin biosynthesis
  JOURNAL   Appl. Environ. Microbiol. 72 (12), 7477-7484 (2006)
  PUBMED    17012596
REFERENCE   2  (bases 1 to 8742)
  AUTHORS   Steinbrenner J, Sandmann G.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-FEB-2006) Plant Physiology and Biochemistry, 
            University of Konstanz, Universitaetsstr. 10, Konstanz 78457, 
            Germany
REFERENCE   3  (bases 1 to 8742)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 8742)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Appl. 
            Environ. Microbiol."; date: "2006"; volume: "72"; issue: "12"; 
            pages: "7477-7484"
COMMENT     SGRef: number: 2; type: "Journal Article"; journalName: "Submitted 
            (16-FEB-2006) Plant Physiology and Biochemistry, University of 
            Konstanz, Universitaetsstr. 10, Konstanz 78457, Germany"
COMMENT     SGRef: number: 3; type: "Journal Article"
COMMENT     Name: pPlat-Pds-Mod4.1.
FEATURES             Location/Qualifiers
     source          1..8742
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     gene            134..5825
                     /gene="pdsMod4.1"
                     /label=pdsMod4.1
     regulatory      134..2140
                     /gene="pdsMod4.1"
                     /label=derived from the phytoene desaturase gene
                     /note="derived from the phytoene desaturase gene"
                     /regulatory_class="promoter"
     mRNA            join(2141..2510,2600..2712,2818..3184,3537..3671,3965..4043,
                     4394..4743,4974..5044,5222..5825)
                     /gene="pdsMod4.1"
                     /product="phytoene desaturase"
                     /label=pdsMod4.1 mRNA
     CDS             join(2181..2510,2600..2712,2818..3184,3537..3671,3965..4043,
                     4394..4743,4974..5044,5222..5489)
                     /codon_start=1
                     /gene="pdsMod4.1"
                     /product="phytoene desaturase"
                     /label=pdsMod4.1
                     /protein_id="ABG29431.1"
                     /translation="MQTTMRGQASGSGCTSGRQARGHWSRRSVRERGALRVVAKDYPTP
                     DFQSSDTYQEALSLSTKLRNAPRPAKPLRVVIAGAGLAGLSAAKYLADAGHHPVVLEGR
                     DVLGGKVAAWKDEDGDWYETGLHIFFGAYPNIQNLFKELGIQDRLQWKEHSMIFAMPDA
                     PGEFSRFDFPELPAPWNGIIAILRNNQMLSWPEKIRFRIGLLPAIIFGQRYCEEQDELT
                     VTEWMRKQGVPDRVNEEVFIAMAKALNFINPDDLSMTVVLTALNRFLQEQHGSKMAFLD
                     GAPPERLCQPMVDYFKARGGDLMFNSRVKQIVLNDDKSVKHLALTNGQTVEGDLYISAM
                     PVDIMKILMPDPWASMPYFKQLNGLEGVPVINIHIWFDRKLTTVDHLLFSRSPLLSVYA
                     DMSTTSKEYRDDKKSMLELVFAPAKEWIGRPDEEIIAATMTELERLFPTEVRADQSMAK
                     ILKYKVVKTPLSVYKSTAGREKFRPTQRSPISNFYLAGDYTKQKYRASMEGAVFSGKLV
                     TEAIVEDWSARGVTSSAASRQPALAAAGVVGRVGSSDWARWLQPVGAIAGGCK"
     primer_bind     6387..6403
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     promoter        6410..6428
                     /label=T7 promoter
                     /note="promoter for bacteriophage T7 RNA polymerase"
     misc_feature    complement(6437..6544)
                     /label=MCS
                     /note="pBluescript multiple cloning site"
     promoter        complement(6557..6575)
                     /label=T3 promoter
                     /note="promoter for bacteriophage T3 RNA polymerase"
     primer_bind     complement(6596..6612)
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     protein_bind    complement(6620..6636)
                     /label=lac operator
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     promoter        complement(6644..6674)
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    complement(6689..6710)
                     /label=CAP binding site
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     rep_origin      complement(6998..7586)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     CDS             complement(7760..8617)
                     /label=AmpR
                     /note="beta-lactamase"
     promoter        complement(8618..8722)
                     /label=AmpR promoter

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