pFRT1-gfp-Tel vector (V006194)

Basic Vector Information

Vector Name:
pFRT1-gfp-Tel
Length:
6169 bp
Type:
Fusion vector
Replication origin:
R6K γ ori
Source/Author:
Kang Y, Norris MH, Barrett AR, Wilcox BA, Hoang TT.
Promoter:
Pc

pFRT1-gfp-Tel vector Map

pFRT1-gfp-Tel6169 bp30060090012001500180021002400270030003300360039004200450048005100540057006000oriTrrnB T2 terminatorrrnB T1 terminatorGFPFRTPc promotertonB terminatorTelAKilARBSderived from Burkholderia cenocepacia rpsL promoterR6K gamma ori

pFRT1-gfp-Tel vector Sequence

LOCUS       40924_20511        6169 bp DNA     circular SYN 18-DEC-2018
DEFINITION  Fusion vector pFRT1-gfp-Tel, complete sequence.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 6169)
  AUTHORS   Kang Y, Norris MH, Barrett AR, Wilcox BA, Hoang TT.
  TITLE     Engineering of tellurite-resistant genetic tools for single-copy 
            chromosomal analysis of Burkholderia spp. and characterization of 
            the Burkholderia thailandensis betBA operon
  JOURNAL   Appl. Environ. Microbiol. 75 (12), 4015-4027 (2009)
  PUBMED    19376905
REFERENCE   2  (bases 1 to 6169)
  AUTHORS   Kang Y, Norris MH, Barrett AR, Videau PJA., Wilcox BA, Hoang TT.
  TITLE     Genetic Systems for Single Copy Analysis based on a Non-antibiotic 
            Selectable Marker in Burkholderia spp.
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 6169)
  AUTHORS   Kang Y, Norris MH, Barrett AR, Videau PJA., Wilcox BA, Hoang TT.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-NOV-2008) Microbiology, University of Hawaii at Manoa,
            2538 McCarthy Mall, Snyder Hall 207, Honolulu, HI 96822, USA
REFERENCE   4  (bases 1 to 6169)
  TITLE     Direct Submission
REFERENCE   5  (bases 1 to 6169)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Appl. 
            Environ. Microbiol."; date: "2009"; volume: "75"; issue: "12"; 
            pages: "4015-4027"
COMMENT     SGRef: number: 2; type: "Journal Article"; journalName: 
            "Unpublished"
COMMENT     SGRef: number: 3; type: "Journal Article"; journalName: "Submitted 
            (11-NOV-2008) Microbiology, University of Hawaii at Manoa, 2538 
            McCarthy Mall, Snyder Hall 207, Honolulu, HI 96822, USA"
COMMENT     SGRef: number: 4; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..6169
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     oriT            complement(190..299)
                     /direction=LEFT
                     /label=oriT
                     /note="incP origin of transfer"
     terminator      complement(720..747)
                     /label=rrnB T2 terminator
                     /note="transcription terminator T2 from the E. coli rrnB
                     gene"
     terminator      complement(839..925)
                     /label=rrnB T1 terminator
                     /note="transcription terminator T1 from the E. coli rrnB
                     gene"
     CDS             complement(1528..2241)
                     /label=GFP
                     /note="green fluorescent protein"
     protein_bind    2303..2350
                     /label=FRT
                     /note="FLP-mediated recombination occurs in the 8-bp core 
                     sequence TCTAGAAA (Turan and Bode, 2011)."
     promoter        2461..2489
                     /label=Pc promoter
                     /note="class 1 integron promoter"
     terminator      2613..2644
                     /label=tonB terminator
                     /note="bidirectional E. coli tonB-P14 transcription
                     terminator"
     CDS             complement(2662..3615)
                     /codon_start=1
                     /gene="telB"
                     /product="TelB"
                     /label=telB
                     /note="tellurite resistance"
                     /protein_id="ACJ70712.1"
                     /translation="MNATNTDVFAQVGGLEARGAKMKKRGTRFLIAALAVLAIAGIGAV
                     TGWAISPSATPGSIDVPQVLASTFSDQVPGSEGGGLGGGLPFTSAVGAFTDFMAGPAIF
                     TLGILGIVVAGAVLVFGGEFCGFVRSVCMMVIAVSMIFVSSNLVKGILGGDHDAGPAEP
                     SPRARFMAAVEAKDFARVQELIEARGAKSAADYVLAQLAVAEGLDRKPGARVVVGKAAG
                     SMAMPPAALGFTPRGEAAYAIERSAYGEPRSSIAKQYQQEWNRKAATWWAMAGVAGIIG
                     AILAAAATGFVGLAVSIRNRVKRVRDLLVMEPGAEP"
     gene            complement(2662..3615)
                     /gene="telB"
                     /label=telB
     CDS             complement(3612..4748)
                     /codon_start=1
                     /gene="telA"
                     /product="TelA"
                     /label=telA
                     /note="tellurite resistance"
                     /protein_id="ACJ70713.1"
                     /translation="MNALKTTHDAKAPIVAFDMTPATLRELGLQESDVPEVHAVAQRIE
                     VGSPQTVAEFGRDVAEHTSRYADSLLDQVRNSDLDEAGEKLTQVVAKARSLNVGPLSDN
                     RSRLPLIGPLIDRFRVRSTGFMARFDTTREQIEHLVSEVQTTQQGIAQRNASLDEMFAA
                     VREEHRLLGVHIAAGKVRLAELREQAEGLRGNVGNDPGRVQELADLDAMVANLDKRIGD
                     LIALQHSAMQSLPTIRMIQANNQMLVDKFHTIREITVPAWKRQFMLALSLNEQKNAVEL
                     ATAIDDTTNDLMKRNAALLHRTSVETAKENQRLVIDVDTLKQVQTTLIKTVEDVIRIQQ
                     EGVQKRKDAEKQIAAMRGDLQAKLTRQPVRELAQQESV"
     gene            complement(3612..4748)
                     /gene="telA"
                     /label=telA
     CDS             complement(4766..5539)
                     /codon_start=1
                     /gene="kilA"
                     /product="KilA"
                     /label=kilA
                     /note="tellurite resistance"
                     /protein_id="ACJ70714.1"
                     /translation="MEEQSVNMARLKGEVLPALFASPATIGEYGAGIDGADSLNELSNL
                     MEHGAVAALADKISQIVAKLADADPRKIAEKPTWFEKMLGREVERQVRYQVARKTLDQL
                     LDEAEGVAQRVRDTLRALDDMLNTHEAEVDRLRAYIQAGREFLDENPEAGAAKAGVIEF
                     DKPRERFARKLANLATLMASHEMSVTQMKLTRAQAVDMLDRFSETASVLVPVWRQHTLA
                     LITTKNMNPAMVAEAAKAHQALMRSLSQSLEGINQ"
     gene            complement(4766..5539)
                     /gene="kilA"
                     /label=kilA
     RBS             complement(5546..5568)
                     /label=RBS
                     /note="efficient ribosome binding site from bacteriophage
                     T7 gene 10 (Olins and Rangwala, 1989)"
     regulatory      complement(5579..5620)
                     /note="derived from Burkholderia cenocepacia rpsL promoter"
                     /regulatory_class="promoter"
     rep_origin      5760..6145
                     /label=R6K gamma ori
                     /note="gamma replication origin from E. coli plasmid R6K;
                     requires the R6K initiator protein pi for replication"

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