pFNK-503-qscrsaL vector (V006208)

Basic Vector Information

Vector Name:
pFNK-503-qscrsaL
Antibiotic Resistance:
Kanamycin
Length:
3756 bp
Type:
Cloning vector
Replication origin:
p15A ori
Source/Author:
Karig D, Martini KM, Lu T, DeLateur NA, Goldenfeld N, Weiss R.

pFNK-503-qscrsaL vector Map

pFNK-503-qscrsaL3756 bp60012001800240030003600Transcriptional activator protein LasRRBS IIregulatoryprokaryotic; qscrsaLRBSyeGFPrrnB T1 terminatorp15A orilambda t0 terminatorNeoR/KanR

pFNK-503-qscrsaL vector Sequence

LOCUS       V006208                 3756 bp    DNA     circular SYN 18-DEC-2018
DEFINITION  Exported.
ACCESSION   V006208
VERSION     V006208
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
            .
REFERENCE   1  (bases 1 to 3756)
  AUTHORS   Karig D, Martini KM, Lu T, DeLateur NA, Goldenfeld N, Weiss R.
  TITLE     Stochastic Turing patterns in a synthetic bacterial population
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. (2018) In press
   PUBMED   29891706
REFERENCE   2  (bases 1 to 3756)
  AUTHORS   Karig DK.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAY-2018) Research and Development Department, Johns
            Hopkins University Applied Physics Laboratory, 11100 Johns Hopkins
            Rd, Laurel, MD 20723, USA
REFERENCE   3  (bases 1 to 3756)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 3756)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
            SGRef: number: 1; type: "Journal Article"; journalName: "Proc. Natl.
            Acad. Sci. U.S.A. (2018) In press"
            SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
            (04-MAY-2018) Research and Development Department, Johns Hopkins
            University Applied Physics Laboratory, 11100 Johns Hopkins Rd,
            Laurel, MD 20723, USA"
            SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..3756
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     CDS             complement(70..786)
                     /gene="lasR"
                     /label="Transcriptional activator protein LasR"
                     /note="Transcriptional activator protein LasR from
                     Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP
                     104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1).
                     Accession#: P25084"
     regulatory      complement(796..804)
                     /label="RBS II"
                     /note="RBS II"
                     /regulatory_class="ribosome_binding_site"
     regulatory      complement(816..871)
                     /regulatory_class="promoter"
     regulatory      complement(825..830)
                     /regulatory_class="minus_10_signal"
     regulatory      complement(848..853)
                     /regulatory_class="minus_35_signal"
     regulatory      907..963
                     /note="prokaryotic; qscrsaL"
                     /regulatory_class="promoter"
     misc_feature    907..926
                     /label="las box - qscrsaL"
                     /note="las box - qscrsaL"
     RBS             1001..1012
                     /note="strong bacterial ribosome binding site (Elowitz and
                     Leibler, 2000)"
     regulatory      1001..1009
                     /label="RBSII"
                     /note="RBSII"
                     /regulatory_class="ribosome_binding_site"
     CDS             1019..1732
                     /label="yeGFP"
                     /note="yeast-enhanced green fluorescent protein"
     terminator      1823..1909
                     /label="rrnB T1 terminator"
                     /note="transcription terminator T1 from the E. coli rrnB
                     gene"
     rep_origin      complement(2078..2623)
                     /direction=LEFT
                     /label="p15A ori"
                     /note="Plasmids containing the medium-copy-number p15A
                     origin of replication can be propagated in E. coli cells
                     that contain a second plasmid with the ColE1 origin."
     terminator      complement(2737..2831)
                     /label="lambda t0 terminator"
                     /note="transcription terminator from phage lambda"
     CDS             complement(2865..3656)
                     /label="NeoR/KanR"
                     /note="aminoglycoside phosphotransferase"

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