pEX18Km-pheS vector (V006438)

Basic Vector Information

Vector Name:
pEX18Km-pheS
Antibiotic Resistance:
Kanamycin
Length:
5161 bp
Type:
Suicide vector
Replication origin:
ori
Source/Author:
Barrett AR, Kang Y, Inamasu KS, Son MS, Vukovich JM, Hoang TT.
Promoter:
Pc

pEX18Km-pheS vector Map

pEX18Km-pheS5161 bp6001200180024003000360042004800Phenylalanine--tRNA ligase alpha subunitBurkholderia pseudomallei PS12 promoteroriTrrnB T2 terminatorrrnB T1 terminatorM13 fwdMCSM13 revlac operatorlac promoterCAP binding siteoriNeoR/KanRPc promoterAmpR promoter

pEX18Km-pheS vector Sequence

LOCUS       V006438                 5161 bp    DNA     circular SYN 18-DEC-2018
DEFINITION  Exported.
ACCESSION   V006438
VERSION     V006438
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
            .
REFERENCE   1  (bases 1 to 5161)
  AUTHORS   Barrett AR, Kang Y, Inamasu KS, Son MS, Vukovich JM, Hoang TT.
  TITLE     Genetic tools for allelic replacement in Burkholderia species
  JOURNAL   Appl. Environ. Microbiol. 74 (14), 4498-4508 (2008)
   PUBMED   18502918
REFERENCE   2  (bases 1 to 5161)
  AUTHORS   Barrett AR, Kang Y, Vukovich JM, Son MS, Inamasu K, Hoang TT.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2008) Microbiology, University of Hawaii at Manoa,
            2538 McCarthy Mall Snyder Hall Rm 310, Honolulu, HI 96822, USA
REFERENCE   3  (bases 1 to 5161)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 5161)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Appl.
            Environ. Microbiol."; date: "2008"; volume: "74"; issue: "14";
            pages: "4498-4508"
            SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
            (15-FEB-2008) Microbiology, University of Hawaii at Manoa, 2538
            McCarthy Mall Snyder Hall Rm 310, Honolulu, HI 96822, USA"
            SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..5161
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     CDS             complement(318..1328)
                     /gene="pheS"
                     /label="Phenylalanine--tRNA ligase alpha subunit"
                     /note="Phenylalanine--tRNA ligase alpha subunit from
                     Burkholderia pseudomallei (strain 1710b). Accession#:
                     Q3JT08"
     regulatory      complement(1364..1405)
                     /label="Burkholderia pseudomallei PS12 promoter"
                     /note="Burkholderia pseudomallei PS12 promoter"
                     /regulatory_class="promoter"
     oriT            complement(1441..1550)
                     /direction=LEFT
                     /label="oriT"
                     /note="incP origin of transfer"
     terminator      complement(1971..1998)
                     /label="rrnB T2 terminator"
                     /note="transcription terminator T2 from the E. coli rrnB
                     gene"
     terminator      complement(2090..2176)
                     /label="rrnB T1 terminator"
                     /note="transcription terminator T1 from the E. coli rrnB
                     gene"
     primer_bind     2526..2542
                     /label="M13 fwd"
                     /note="common sequencing primer, one of multiple similar
                     variants"
     misc_feature    complement(2546..2602)
                     /label="MCS"
                     /note="pUC18/19 multiple cloning site"
     primer_bind     complement(2612..2628)
                     /label="M13 rev"
                     /note="common sequencing primer, one of multiple similar
                     variants"
     protein_bind    complement(2636..2652)
                     /label="lac operator"
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be
                     relieved by adding lactose or
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     promoter        complement(2660..2690)
                     /label="lac promoter"
                     /note="promoter for the E. coli lac operon"
     protein_bind    complement(2705..2726)
                     /label="CAP binding site"
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     rep_origin      complement(3014..3602)
                     /direction=LEFT
                     /label="ori"
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
                     replication"
     CDS             complement(3976..4767)
                     /label="NeoR/KanR"
                     /note="aminoglycoside phosphotransferase"
     promoter        complement(4916..4944)
                     /label="Pc promoter"
                     /note="class 1 integron promoter"
     promoter        complement(4962..5066)
                     /label="AmpR promoter"

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