pGCAP10 vector (V006076)

Basic Vector Information

Vector Name:
pGCAP10
Antibiotic Resistance:
Ampicillin
Length:
3357 bp
Type:
Cloning vector
Replication origin:
ori
Source/Author:
Oshikawa M, Sugai Y, Usami R, Ohtoko K, Toyama S, Kato S.
Promoter:
SV40

pGCAP10 vector Map

pGCAP103357 bp6001200180024003000SV40 promoterSV40 intronM13 fwdT7 promoterKpnI site for dT tailingT3 promoterSV40 poly(A) signaloriAmpRAmpR promoterf1 oriM13 rev

pGCAP10 vector Sequence

LOCUS       40924_21235        3357 bp DNA     circular SYN 18-DEC-2018
DEFINITION  Cloning vector pGCAP10 DNA, complete sequence.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 3357)
  AUTHORS   Oshikawa M, Sugai Y, Usami R, Ohtoko K, Toyama S, Kato S.
  TITLE     Fine Expression Profiling of Full-length Transcripts using a 
            Size-unbiased cDNA Library Prepared with the Vector-capping Method
  JOURNAL   DNA Res. 15 (3), 123-136 (2008)
  PUBMED    18487259
REFERENCE   2  (bases 1 to 3357)
  AUTHORS   Kato S.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-DEC-2007) Contact:Seishi Kato National Rehabilitation 
            Center for Persons with Disabilities, Research Institute, Department
            of Rehabilitation Engineering; 4-1 Namiki, Tokorozawa, Saitama 
            359-8555, Japan
REFERENCE   3  (bases 1 to 3357)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 3357)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "DNA Res."; 
            date: "2008"; volume: "15"; issue: "3"; pages: "123-136"
COMMENT     SGRef: number: 2; type: "Journal Article"; journalName: "Submitted 
            (11-DEC-2007) Contact:Seishi Kato National Rehabilitation Center for
            Persons with Disabilities, Research Institute, Department of 
            Rehabilitation Engineering; 4-1 Namiki, Tokorozawa, Saitama 
            359-8555, Japan"
COMMENT     SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..3357
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     promoter        18..347
                     /label=SV40 promoter
                     /note="SV40 enhancer and early promoter"
     intron          386..482
                     /label=SV40 intron
                     /note="modified SV40 intron with splice donor and acceptor 
                     sites"
     primer_bind     526..542
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     promoter        550..568
                     /label=T7 promoter
                     /note="promoter for bacteriophage T7 RNA polymerase"
     misc_feature    601..606
                     /label=KpnI site for dT tailing
                     /note="KpnI site for dT tailing"
     promoter        complement(622..640)
                     /label=T3 promoter
                     /note="promoter for bacteriophage T3 RNA polymerase"
     polyA_signal    complement(642..776)
                     /label=SV40 poly(A) signal
                     /note="SV40 polyadenylation signal"
     rep_origin      complement(1074..1662)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     CDS             complement(1836..2693)
                     /codon_start=1
                     /label=AmpR
                     /note="beta-lactamase"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     promoter        complement(2694..2798)
                     /label=AmpR promoter
     rep_origin      complement(2825..3280)
                     /direction=LEFT
                     /label=f1 ori
                     /note="f1 bacteriophage origin of replication; arrow
                     indicates direction of (+) strand synthesis"
     primer_bind     3298..3314
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"

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