pGAPDH.Rep68 vector (V006091)

Basic Vector Information

Vector Name:
pGAPDH.Rep68
Antibiotic Resistance:
Ampicillin
Length:
5439 bp
Type:
Expression shuttle vector
Replication origin:
ori
Source/Author:
van Nierop GP, de Vries AA, Holkers M, Vrijsen KR, Goncalves MA.

pGAPDH.Rep68 vector Map

pGAPDH.Rep685439 bp60012001800240030003600420048005400Protein Rep68HSV TK poly(A) signalM13 fwdAmpR promoterAmpRoriCAP binding sitelac promoterlac operatorM13 rev

pGAPDH.Rep68 vector Sequence

LOCUS       V006091                 5439 bp    DNA     circular SYN 18-DEC-2018
DEFINITION  Exported.
ACCESSION   V006091
VERSION     V006091
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
            .
REFERENCE   1  (bases 1 to 5439)
  AUTHORS   van Nierop GP, de Vries AA, Holkers M, Vrijsen KR, Goncalves MA.
  TITLE     Stimulation of homology-directed gene targeting at an endogenous
            human locus by a nicking endonuclease
  JOURNAL   Nucleic Acids Res. 37 (17), 5725-5736 (2009)
   PUBMED   19651880
REFERENCE   2  (bases 1 to 5439)
  AUTHORS   van Nierop GP, de Vries AA, Holkers M, Vrijsen KR, Goncalves MA.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JUL-2009) Molecular Cell Biology, Leiden University
            Medical Center, Einthovenweg 20, Leiden, Zuid Holland 2333 ZC, The
            Netherlands
REFERENCE   3  (bases 1 to 5439)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 5439)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Nucleic
            Acids Res."; date: "2009"; volume: "37"; issue: "17"; pages:
            "5725-5736"
            SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
            (14-JUL-2009) Molecular Cell Biology, Leiden University Medical
            Center, Einthovenweg 20, Leiden, Zuid Holland 2333 ZC, The
            Netherlands"
            SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..5439
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     CDS             8..1615
                     /gene="Rep68"
                     /label="Protein Rep68"
                     /note="Protein Rep68 from Adeno-associated virus 2 (isolate
                     Srivastava/1982). Accession#: P03132"
     polyA_signal    1688..1736
                     /label="HSV TK poly(A) signal"
                     /note="herpes simplex virus thymidine kinase
                     polyadenylation signal (Cole and Stacy, 1985)"
     primer_bind     complement(2223..2239)
                     /label="M13 fwd"
                     /note="common sequencing primer, one of multiple similar
                     variants"
     promoter        2713..2817
                     /label="AmpR promoter"
     CDS             2818..3675
                     /label="AmpR"
                     /note="beta-lactamase"
     rep_origin      3849..4437
                     /label="ori"
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
                     replication"
     protein_bind    4725..4746
                     /label="CAP binding site"
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     promoter        4761..4791
                     /label="lac promoter"
                     /note="promoter for the E. coli lac operon"
     protein_bind    4799..4815
                     /label="lac operator"
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be
                     relieved by adding lactose or
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     primer_bind     4823..4839
                     /label="M13 rev"
                     /note="common sequencing primer, one of multiple similar
                     variants"

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