DP6 vector (V007025)

Price Information

Cat No. Plasmid Name Availability Add to cart
V007025 DP6 In stock, 1 week for quality controls

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Two tubes of lyophilized plasmid will be delivered, each tube is about 5µg.

Basic Vector Information

Vector Name:
DP6
Antibiotic Resistance:
Chloramphenicol
Length:
8639 bp
Type:
Bacterial Expression
Replication origin:
CloDF13 ori
Copy Number:
High Copy
Promoter:
araBAD

DP6 vector Vector Map

DP68639 bp4008001200160020002400280032003600400044004800520056006000640068007200760080008400araCpBAD ReverserrnB T1 terminatorrrnB T2 terminatortet operatorpIIICloDF13 oriCmRtonB terminatorPmCDA1UGITranscriptional repressor MprANegative modulator of initiation of replicationDNA adenine methylaseDNA polymerase III subunit epsilonaraBAD promoter

Plasmid Protocol

1. Centrifuge at 5,000×g for 5 min.

2. Carefully open the tube and add 20 μl of sterile water to dissolve the DNA.

3. Close the tube and incubate for 10 minutes at room temperature.

4. Briefly vortex the tube and then do a quick spin to concentrate the liquid at the bottom. Speed is less than 5000×g.

5. Store the plasmid at -20 ℃.

6. The concentration of plasmid re-measurement sometimes differs from the nominal value, which may be due to the position of the lyophilized plasmid in the tube, the efficiency of the re-dissolution, the measurement bias, and adsorption on the wall of the tube, therefore, it is recommended to transform and extract the plasmid before using it

General Plasmid Transform Protocol

1. Take one 100μl of the competent cells and thaw it on ice for 10min, add 2μl of plasmid, then ice bath for 30min, then heat-shock it at 42℃ for 60s, do not stir, and then ice bath for 2min.

2. Add 900μl of LB liquid medium without antibiotics, and incubate at 37℃ for 45min (30℃ for 1-1.5 hours) with 180rpm shaking.

3. Centrifuge at 6000rpm for 5min, leave only 100μl of supernatant to resuspend the bacterial precipitate and spread it onto the target plasmid-resistant LB plate.

4. Invert the plate and incubate at 37℃ for 14h, or at 30℃ for 20h.

5. Pick a single colony into LB liquid medium, add the corresponding antibiotics, incubate at 220rpm for 14h, and extract the plasmid according to the experimental needs and the instructions of the plasmid extraction kit.

DP6 vector Sequence

Copy Sequence

Download GeneBank File(.gb)

LOCUS       V007025                 8639 bp    DNA     circular SYN 13-MAY-2021
DEFINITION  Exported.
ACCESSION   V007025
VERSION     V007025
KEYWORDS    DP6
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
            .
REFERENCE   1  (bases 1 to 8639)
  AUTHORS   Badran AH, Liu DR
  TITLE     Development of potent in vivo mutagenesis plasmids with broad
            mutational spectra.
  JOURNAL   Nat Commun. 2015 Oct 7;6:8425. doi: 10.1038/ncomms9425.
   PUBMED   26443021
REFERENCE   2  (bases 1 to 8639)
  TITLE     Direct Submission
REFERENCE   3  (bases 1 to 8639)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Nat
            Commun."; date: "2015-10-7"; pages: "
            10.1038/ncomms9425"
            SGRef: number: 2; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..8639
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     CDS             1..876
                     /label="araC"
                     /note="L-arabinose regulatory protein"
     primer_bind     complement(929..946)
                     /label="pBAD Reverse"
                     /note="For vectors with E. coli araBAD promoter, reverse
                     primer"
     terminator      1099..1185
                     /label="rrnB T1 terminator"
                     /note="transcription terminator T1 from the E. coli rrnB
                     gene"
     terminator      1277..1304
                     /label="rrnB T2 terminator"
                     /note="transcription terminator T2 from the E. coli rrnB
                     gene"
     protein_bind    1468..1486
                     /label="tet operator"
                     /note="bacterial operator O2 for the tetR and tetA genes"
     CDS             1556..2827
                     /label="M13 gene III"
                     /note="pIII"
     rep_origin      2987..3725
                     /label="CloDF13 ori"
                     /note="Plasmids containing the CloDF13 (CDF) origin of
                     replication can be propagated in E. coli cells that contain
                     additional plasmids with compatible origins."
     CDS             3878..4534
                     /label="CmR"
                     /note="chloramphenicol acetyltransferase"
     terminator      complement(4553..4584)
                     /label="tonB terminator"
                     /note="bidirectional E. coli tonB-P14 transcription
                     terminator"
     CDS             complement(4614..5237)
                     /label="PmCDA1"
                     /note="cytidine deaminase from the sea lamprey Petromyzon
                     marinus (Rogozin et al., 2007)"
     CDS             complement(5270..5521)
                     /label="UGI"
                     /note="uracil-DNA glycosylase inhibitor from a Bacillus
                     subtilis bacteriophage (Mol et al., 1995)"
     CDS             complement(5553..6080)
                     /gene="mprA"
                     /label="Transcriptional repressor MprA"
                     /note="Transcriptional repressor MprA from Escherichia coli
                     (strain K12). Accession#: P0ACR9"
     CDS             complement(6112..6654)
                     /gene="seqA"
                     /label="Negative modulator of initiation of replication"
                     /note="Negative modulator of initiation of replication from
                     Escherichia coli (strain K12). Accession#: P0AFY8"
     CDS             complement(6686..7519)
                     /gene="dam"
                     /label="DNA adenine methylase"
                     /note="DNA adenine methylase from Escherichia coli (strain
                     K12). Accession#: P0AEE8"
     CDS             complement(7551..8279)
                     /gene="dnaQ"
                     /label="DNA polymerase III subunit epsilon"
                     /note="DNA polymerase III subunit epsilon from Escherichia
                     coli (strain K12). Accession#: P03007"
     promoter        complement(8329..8613)
                     /label="araBAD promoter"
                     /note="promoter of the L-arabinose operon of E. coli; the
                     araC regulatory gene is transcribed in the opposite
                     direction (Guzman et al., 1995)"