Basic Vector Information
- Vector Name:
- pCN42
- Antibiotic Resistance:
- Ampicillin
- Length:
- 7297 bp
- Type:
- Staphylococcal shuttle vector
- Replication origin:
- ori
- Source/Author:
- Riojas MA, Bojja K, Byrd R, Hamid S, Mooney S, Monaco A, Alalade R, King S, Hazbon MH.
pCN42 vector Map
pCN42 vector Sequence
LOCUS V008339 7297 bp DNA circular SYN 17-DEC-2018
DEFINITION Exported.
ACCESSION V008339
VERSION V008339
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 7297)
AUTHORS Riojas MA, Bojja K, Byrd R, Hamid S, Mooney S, Monaco A, Alalade R,
King S, Hazbon MH.
TITLE Sequencing of a set of cassette-based shuttle vectors for
Gram-positive bacteria deposited at BEI resources from the NARSA
collection
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 7297)
AUTHORS Riojas MA, Bojja K, Byrd R, Hamid S, Mooney S, Monaco A, Alalade R,
King S, Hazbon MH.
TITLE Direct Submission
JOURNAL Submitted (14-MAY-2015) BEI Bacteriology, BEI Resources/American
Type and Culture Collection (ATCC), 10801 University Boulevard,
Manassas, VA 20110-2209, USA
REFERENCE 3 (bases 1 to 7297)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 7297)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Assembly Method :: CLC Genomics Workbench v. 7.0.2
Coverage :: 32653
Sequencing Technology :: Illumina
##Assembly-Data-END##
SGRef: number: 1; type: "Journal Article"; journalName:
"Unpublished"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(14-MAY-2015) BEI Bacteriology, BEI Resources/American Type and
Culture Collection (ATCC), 10801 University Boulevard, Manassas, VA
20110-2209, USA"
SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..7297
/mol_type="other DNA"
/organism="synthetic DNA construct"
misc_feature 1..2089
/note="T181copwt repC; Staphylococcus replication cassette;
derived from J04764"
misc_feature 159..392
/label="RS-B site"
/note="RS-B site"
rep_origin 656..823
/note="ori; derived from Staphylococcus aureus"
CDS 688..1632
/codon_start=1
/product="RepC protein"
/label="RepC protein"
/note="polypeptide A"
/protein_id="AMR43726.1"
/translation="MYKNNHANHSNHLENHDLDNFSKTGYSNSRLDAHTVCISDPKLSF
DAMTIVGNLNRDNAQALSKFMSVEPQIRLWDILQTKFKAKALQEKVYIEYDKVKADSWD
RRNMRIEFNPNKLTRDEMIWLKQNIISYMEDDGFTRLDLAFDFEDDLSDYYAMSDKAVK
KTIFYGRNGKPETKYFGVRDSNRFIRIYNKKQERKDNADAEVMSEHLWRVEIELKRDMV
DYWNDCFSDLHILQPDWKTIQRTADRAIVFMLLSDEEEWGKLHRNSRTKYKNLIKEISP
VDLTDLMKSTLKANEKQLQKQIDFWQHEFKFWK"
variation 1132..1134
/label="E149D"
/note="E149D"
misc_feature 1794..2089
/label="truncated polypeptide B"
/note="truncated polypeptide B"
misc_feature 2408..2467
/label="leader peptide"
/note="leader peptide"
CDS 2527..3258
/gene="ermC"
/label="rRNA adenine N-6-methyltransferase"
/note="rRNA adenine N-6-methyltransferase from
Staphylococcus aureus. Accession#: P02979"
promoter 3626..3730
/label="AmpR promoter"
CDS 3731..4588
/label="AmpR"
/note="beta-lactamase"
rep_origin 4762..5350
/direction=RIGHT
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS 5702..6067
/gene="cadC"
/label="Cadmium resistance transcriptional regulatory
protein CadC"
/note="Cadmium resistance transcriptional regulatory
protein CadC from Staphylococcus aureus. Accession#:
P20047"
misc_feature 6073..6117
/note="polylinker; derived from M13mp19"
CDS 6147..6989
/gene="blaZ"
/label="Beta-lactamase"
/note="Beta-lactamase from Staphylococcus aureus.
Accession#: P00807"
misc_feature 7156..7293
/label="TT"
/note="TT"
This page is informational only.