Basic Vector Information
- Vector Name:
- pCFP-N-GW
- Antibiotic Resistance:
- Chloramphenicol
- Length:
- 6448 bp
- Type:
- Mammalian vector
- Replication origin:
- ori
- Source/Author:
- De Schamphelaire W, Olbrechts A, Meert J, Verhelst K, Roggeman Fonseca M, Vanhoucke M, Beyaert R.
- Promoter:
- CMV
pCFP-N-GW vector Map
pCFP-N-GW vector Sequence
LOCUS 40924_10501 6448 bp DNA circular SYN 17-DEC-2018 DEFINITION Mammalian vector pCFP-N-GW, complete sequence. ACCESSION . VERSION . KEYWORDS . SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 6448) AUTHORS De Schamphelaire W, Olbrechts A, Meert J, Verhelst K, Roggeman Fonseca M, Vanhoucke M, Beyaert R. TITLE BCCM/LMBP Plasmid collection JOURNAL Unpublished REFERENCE 2 (bases 1 to 6448) AUTHORS De Schamphelaire W. TITLE Direct Submission JOURNAL Submitted (02-FEB-2017) BCCM/LMBP, Universiteit Gent, Technologiepark 927, 9052, BELGIUM REFERENCE 3 (bases 1 to 6448) TITLE Direct Submission REFERENCE 4 (bases 1 to 6448) AUTHORS . TITLE Direct Submission COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Unpublished" COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted (02-FEB-2017) BCCM/LMBP, Universiteit Gent, Technologiepark 927, 9052, BELGIUM" COMMENT SGRef: number: 3; type: "Journal Article" FEATURES Location/Qualifiers source 1..6448 /mol_type="other DNA" /organism="synthetic DNA construct" rep_origin 39..365 /label=pMB1 ori /note="pMB1 ori" enhancer 432..735 /label=CMV enhancer /note="human cytomegalovirus immediate early enhancer" promoter 736..939 /label=CMV promoter /note="human cytomegalovirus (CMV) immediate early promoter" CDS 984..1700 /codon_start=1 /label=ECFP /note="enhanced CFP" /translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL KFICTTGKLPVPWPTLVTTLTWGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDD GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYISHNVYITADKQKNGIK ANFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLL EFVTAAGITLGMDELYK" protein_bind 1719..1843 /label=attR1 /note="recombination site for the Gateway(R) LR reaction" promoter 1868..1898 /label=lac UV5 promoter /note="E. coli lac promoter with an 'up' mutation" CDS 1952..2608 /codon_start=1 /label=CmR /note="chloramphenicol acetyltransferase" /translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA" CDS 2953..3255 /codon_start=1 /label=ccdB /note="CcdB, a bacterial toxin that poisons DNA gyrase" /translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK VSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI" protein_bind complement(3299..3423) /label=attR2 /note="recombination site for the Gateway(R) LR reaction" misc_feature 3427..3483 /label=MCS /note="multiple cloning site" polyA_signal 3607..3728 /label=SV40 poly(A) signal /note="SV40 polyadenylation signal" rep_origin complement(3735..4190) /direction=LEFT /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" promoter 4217..4321 /label=AmpR promoter promoter 4323..4680 /label=SV40 promoter /note="SV40 enhancer and early promoter" CDS 4715..5506 /codon_start=1 /label=NeoR/KanR /note="aminoglycoside phosphotransferase" /translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ GLAPAELFARLKASMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF" polyA_signal 5741..5788 /label=HSV TK poly(A) signal /note="herpes simplex virus thymidine kinase polyadenylation signal (Cole and Stacy, 1985)" rep_origin 6117..6448 /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication"
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