Basic Vector Information
- Vector Name:
- pEF6-FLAG-hPKR-ND
- Antibiotic Resistance:
- Ampicillin
- Length:
- 6528 bp
- Type:
- Mammalian expression vector
- Replication origin:
- ori
- Source/Author:
- De Schamphelaire W, Olbrechts A, Meert J, Verhelst K, Roggeman Fonseca M, Vanhoucke M, Beyaert R.
- Promoter:
- EF-1α
pEF6-FLAG-hPKR-ND vector Map
pEF6-FLAG-hPKR-ND vector Sequence
LOCUS 40924_17024 6528 bp DNA circular SYN 17-DEC-2018 DEFINITION Mammalian expression vector pEF6-FLAG-hPKR-ND, complete sequence. ACCESSION . VERSION . KEYWORDS . SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 6528) AUTHORS De Schamphelaire W, Olbrechts A, Meert J, Verhelst K, Roggeman Fonseca M, Vanhoucke M, Beyaert R. TITLE BCCM/LMBP Plasmid collection JOURNAL Unpublished REFERENCE 2 (bases 1 to 6528) AUTHORS De Schamphelaire W. TITLE Direct Submission JOURNAL Submitted (02-FEB-2017) BCCM/LMBP, Universiteit Gent, Technologiepark 927, 9052, BELGIUM REFERENCE 3 (bases 1 to 6528) TITLE Direct Submission REFERENCE 4 (bases 1 to 6528) AUTHORS . TITLE Direct Submission COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Unpublished" COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted (02-FEB-2017) BCCM/LMBP, Universiteit Gent, Technologiepark 927, 9052, BELGIUM" COMMENT SGRef: number: 3; type: "Journal Article" FEATURES Location/Qualifiers source 1..6528 /mol_type="other DNA" /organism="synthetic DNA construct" promoter 351..1529 /label=EF-1-alpha promoter /note="strong constitutive promoter for human elongation factor EF-1-alpha" promoter 1546..1564 /label=T7 promoter /note="promoter for bacteriophage T7 RNA polymerase" CDS 1600..1623 /label=FLAG /note="FLAG(R) epitope tag, followed by an enterokinase cleavage site" CDS 1633..2388 /codon_start=1 /note="unnamed protein product; hPKR-ND" /protein_id="SJL86764.1" /translation="MAGDLSAGFFMEELNTYRQKQGVVLKYQELPNSGPPHDRRFTFQV IIDGREFPEGEGRSKKEAKNAAAKLAVEILNKEKKAVSPLLLTTTNSSEGLSMGNYIGL INRIAQKKRLTVNYEQCASGVHGPEGFHYKCKMGQKEYSIGTGSTKQEAKQLAAKLAYL QILSEETSVKSDYLSSGSFATTCESQSNSLVTSTLASESSSEGDFSADTSEINSNSDSL NSSSLLMNGLRNNQRKAKRSLAPRFDLPD" CDS 2410..2439 /label=Myc /note="Myc (human c-Myc proto-oncogene) epitope tag" CDS 2455..2472 /label=6xHis /note="6xHis affinity tag" polyA_signal 2501..2725 /label=bGH poly(A) signal /note="bovine growth hormone polyadenylation signal" rep_origin 2771..3199 /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" promoter 3213..3542 /label=SV40 promoter /note="SV40 enhancer and early promoter" promoter 3590..3637 /label=EM7 promoter /note="synthetic bacterial promoter" CDS 3656..4051 /label=BSD /note="blasticidin S deaminase" polyA_signal 4212..4345 /label=SV40 poly(A) signal /note="SV40 polyadenylation signal" primer_bind complement(4382..4398) /label=M13 rev /note="common sequencing primer, one of multiple similar variants" protein_bind complement(4406..4422) /label=lac operator /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." promoter complement(4430..4460) /label=lac promoter /note="promoter for the E. coli lac operon" protein_bind complement(4475..4496) /label=CAP binding site /note="CAP binding activates transcription in the presence of cAMP." rep_origin complement(4773..5361) /direction=LEFT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" CDS complement(5535..6392) /label=AmpR /note="beta-lactamase" promoter complement(6393..6497) /label=AmpR promoter
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