pAJM.884 vector (V009541)

Basic Vector Information

Vector Name:
pAJM.884
Antibiotic Resistance:
Kanamycin
Length:
3902 bp
Type:
Cloning vector
Replication origin:
p15A ori
Source/Author:
Meyer AJ, Segall-Shapiro TH, Voigt CA.

pAJM.884 vector Vector Map

pAJM.8843902 bp60012001800240030003600L3S3P21PAcusTRSV HHRzB0064EYFPL3S2P21PLacIQacu2Transcriptional regulator AcuRinduction operon terminator regionp15A oriKanR

pAJM.884 vector Sequence

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Download GeneBank File(.gb)

LOCUS       V009541                 3902 bp    DNA     circular SYN 17-DEC-2018
DEFINITION  Exported.
ACCESSION   V009541
VERSION     V009541
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
            .
REFERENCE   1  (bases 1 to 3902)
  AUTHORS   Meyer AJ, Segall-Shapiro TH, Voigt CA.
  TITLE     Marionette: E. coli containing 12 highly-optimized small molecule
            sensors
  JOURNAL   bioRxivorg 285866, 1-26 (2018)
REFERENCE   2  (bases 1 to 3902)
  AUTHORS   Meyer AJ, Segall-Shapiro TH, Voigt CA.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAR-2018) Synthetic Biology Center, Department of
            Biological Engineering, Massachusetts Institute of Technology, 77
            Massachusetts Avenue, Cambridge, MA 02139, USA
REFERENCE   3  (bases 1 to 3902)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 3902)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "bioRxivorg
            285866, 1-26 (2018)"
            SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
            (21-MAR-2018) Synthetic Biology Center, Department of Biological
            Engineering, Massachusetts Institute of Technology, 77 Massachusetts
            Avenue, Cambridge, MA 02139, USA"
            SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..3902
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     regulatory      1..53
                     /label="L3S3P21"
                     /note="L3S3P21"
                     /regulatory_class="terminator"
     regulatory      73..146
                     /label="PAcu"
                     /note="PAcu"
                     /regulatory_class="promoter"
     regulatory      108..113
                     /regulatory_class="minus_35_signal"
     misc_feature    114..135
                     /label="AcuO operator"
                     /note="AcuO operator"
     regulatory      131..136
                     /regulatory_class="minus_10_signal"
     misc_RNA        148..198
                     /label="sTRSV HHRz"
                     /note="hammerhead ribozyme from the tobacco ringspot virus
                     satellite RNA (Khvorova et al., 2003)"
     regulatory      230..241
                     /label="B0064"
                     /note="B0064"
                     /regulatory_class="ribosome_binding_site"
     CDS             248..964
                     /label="EYFP"
                     /note="enhanced YFP"
     regulatory      968..1028
                     /label="L3S2P21"
                     /note="L3S2P21"
                     /regulatory_class="terminator"
     regulatory      1033..1086
                     /label="PLacIQ"
                     /note="PLacIQ"
                     /regulatory_class="promoter"
     regulatory      1051..1056
                     /regulatory_class="minus_35_signal"
     regulatory      1074..1079
                     /regulatory_class="minus_10_signal"
     regulatory      1087..1114
                     /label="acu2"
                     /note="acu2"
                     /regulatory_class="ribosome_binding_site"
     CDS             1115..1771
                     /gene="acuR"
                     /label="Transcriptional regulator AcuR"
                     /note="Transcriptional regulator AcuR from Cereibacter
                     sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG
                     31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.).
                     Accession#: Q3J6K8"
     regulatory      1787..2041
                     /label="induction operon terminator region"
                     /note="induction operon terminator region"
                     /regulatory_class="terminator"
     rep_origin      complement(2353..2898)
                     /direction=LEFT
                     /label="p15A ori"
                     /note="Plasmids containing the medium-copy-number p15A
                     origin of replication can be propagated in E. coli cells
                     that contain a second plasmid with the ColE1 origin."
     CDS             complement(2990..3802)
                     /label="KanR"
                     /note="aminoglycoside phosphotransferase"

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