pAJ401mds1 vector (V009557)

Basic Vector Information

Vector Name:
pAJ401mds1
Antibiotic Resistance:
Ampicillin
Length:
7720 bp
Type:
Yeast expression vector
Replication origin:
ori
Host:
Yeast
Source/Author:
De Schamphelaire W, Olbrechts A, Meert J, Verhelst K, Roggeman Fonseca M, Vanhoucke M, Beyaert R.
Promoter:
URA3

pAJ401mds1 vector Map

pAJ401mds17720 bp3006009001200150018002100240027003000330036003900420045004800510054005700600063006600690072007500M13 fwdPGK promoter5' UTR mds1unnamed protein product; mds13' UTR mds1PGK terminatorM13 revlac operatorlac promoterCAP binding siteURA3URA3 promoterFRToriAmpRAmpR promoter

pAJ401mds1 vector Sequence

LOCUS       40924_4174        7720 bp DNA     circular SYN 17-DEC-2018
DEFINITION  Yeast expression vector pAJ401mds1, complete sequence.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 7720)
  AUTHORS   De Schamphelaire W, Olbrechts A, Meert J, Verhelst K, Roggeman 
            Fonseca M, Vanhoucke M, Beyaert R.
  TITLE     BCCM/LMBP Plasmid collection
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7720)
  AUTHORS   De Schamphelaire W.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2017) BCCM/LMBP, Universiteit Gent, 
            Technologiepark 927, 9052, BELGIUM
REFERENCE   3  (bases 1 to 7720)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 7720)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: 
            "Unpublished"
COMMENT     SGRef: number: 2; type: "Journal Article"; journalName: "Submitted 
            (02-FEB-2017) BCCM/LMBP, Universiteit Gent, Technologiepark 927, 
            9052, BELGIUM"
COMMENT     SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..7720
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     primer_bind     379..395
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     regulatory      486..1305
                     /label=PGK promoter
                     /note="PGK promoter"
                     /regulatory_class="promoter"
     misc_feature    1341..1672
                     /label=5' UTR mds1
                     /note="5' UTR mds1"
     CDS             1673..3244
                     /codon_start=1
                     /note="unnamed protein product; mds1"
                     /protein_id="SJL87803.1"
                     /translation="MRFPSSSVLALGLIGPALAYPKPGATKRGSPNPTRAAAVKAAFQT
                     SWNAYHHFAFPHDDLHPVSNSFDDERNGWGSSAIDGLDTAILMGDADIVNTILQYVPQI
                     NFTTTAVANQGSSVFETNIRYLGGLLSAYDLLRGPFSSLATNQTLVNSLLRQAQTLANG
                     LKVAFTTPSGVPDPTVFFNPTVRRSGASSNNVAEIGSLVLEWTRLSDLTGNPQYAQLAQ
                     KGESYLLNPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFYEYLIKMYLYDPVA
                     FAHYKDRWVLGADSTIGHLGSHPSTRKDLTFLSSYNGQSTSPNSGHLASFGGGNFILGG
                     ILLNEQKYIDFGIKLASSYFGTYTQTASGIGPEGFAWVDSVTGAGGSPPSSQSGFYSSA
                     GFWVTAPYYILRPETLESLYYAYRVTGDSKWQDLAWEALSAIEDACRAGSAYSSINDVT
                     QANGGGASDDMESFWFAEALKYAYLIFAEESDVQVQATGGNKFVFNTEAHPFSIRSSSR
                     RGGHLA"
     misc_feature    3245..3490
                     /label=3' UTR mds1
                     /note="3' UTR mds1"
     regulatory      3506..3769
                     /label=PGK terminator
                     /note="PGK terminator"
                     /regulatory_class="terminator"
     primer_bind     complement(3788..3804)
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     protein_bind    complement(3812..3828)
                     /label=lac operator
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     promoter        complement(3836..3866)
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    complement(3881..3902)
                     /label=CAP binding site
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     CDS             complement(4109..4909)
                     /label=URA3
                     /note="orotidine-5'-phosphate decarboxylase, required for
                     uracil biosynthesis"
     promoter        complement(4910..5126)
                     /label=URA3 promoter
     protein_bind    5313..5360
                     /label=FRT
                     /note="FLP-mediated recombination occurs in the 8-bp core 
                     sequence TCTAGAAA (Turan and Bode, 2011)."
     rep_origin      complement(5901..6489)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     CDS             complement(6663..7520)
                     /label=AmpR
                     /note="beta-lactamase"
     promoter        complement(7521..7625)
                     /label=AmpR promoter

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