Basic Vector Information
- Vector Name:
- pcDNA-mBeta-cat-Tcf3
- Length:
- 7657 bp
- Type:
- UNVERIFIED: Cloning vector
- Replication origin:
- ori
- Source/Author:
- Relaix F, Murphy P, Avner P, Duffy DJ.
- Promoter:
- SV40
pcDNA-mBeta-cat-Tcf3 vector Map
pcDNA-mBeta-cat-Tcf3 vector Sequence
LOCUS 40924_9851 7657 bp DNA circular SYN 17-DEC-2018 DEFINITION UNVERIFIED: Cloning vector pcDNA-mBeta-cat-Tcf3, complete sequence. ACCESSION . VERSION . KEYWORDS . SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 7657) AUTHORS Relaix F, Murphy P, Avner P, Duffy DJ. TITLE MYCN Integrative Omics Reveal Context Dependent Transcriptional Repressor/Activator Functions and Discover Potential Therapeutic Targets JOURNAL Unpublished REFERENCE 2 (bases 1 to 7657) AUTHORS Relaix F, Murphy P, Avner P, Duffy DJ. TITLE Direct Submission JOURNAL Submitted (11-JUL-2014) Systems Biology Ireland, University College Dublin, Belfield, Dublin, Leinster 0004, Ireland REFERENCE 3 (bases 1 to 7657) TITLE Direct Submission REFERENCE 4 (bases 1 to 7657) AUTHORS . TITLE Direct Submission COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Unpublished" COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted (11-JUL-2014) Systems Biology Ireland, University College Dublin, Belfield, Dublin, Leinster 0004, Ireland" COMMENT SGRef: number: 3; type: "Journal Article" COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## GenBank staff is unable to verify sequence and/or annotation provided by the submitter. FEATURES Location/Qualifiers source 1..7657 /mol_type="other DNA" /organism="synthetic DNA construct" misc_feature complement(827..1206) /label=ISS /note="immunostimulatory sequence from the AmpR gene; contains unmethylated CpG dinucleotides in the context of 5'-AACGTT-3' (Sato et al., 1996)" promoter complement(1391..1495) /label=AmpR promoter enhancer 1761..2140 /label=CMV enhancer /note="human cytomegalovirus immediate early enhancer" promoter 2141..2344 /label=CMV promoter /note="human cytomegalovirus (CMV) immediate early promoter" promoter 2389..2407 /label=T7 promoter /note="promoter for bacteriophage T7 RNA polymerase" CDS 2440..2463 /codon_start=1 /label=FLAG /note="FLAG(R) epitope tag, followed by an enterokinase cleavage site" /translation="DYKDDDDK" promoter complement(4707..4725) /label=T3 promoter /note="promoter for bacteriophage T3 RNA polymerase" promoter complement(4736..4754) /label=SP6 promoter /note="promoter for bacteriophage SP6 RNA polymerase" polyA_signal 4780..5004 /label=bGH poly(A) signal /note="bovine growth hormone polyadenylation signal" rep_origin 5050..5478 /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" promoter 5492..5821 /label=SV40 promoter /note="SV40 enhancer and early promoter" polyA_signal 6855..6988 /label=SV40 poly(A) signal /note="SV40 polyadenylation signal" primer_bind complement(7025..7041) /label=M13 rev /note="common sequencing primer, one of multiple similar variants" protein_bind complement(7049..7065) /label=lac operator /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." promoter complement(7073..7103) /label=lac promoter /note="promoter for the E. coli lac operon" protein_bind complement(7118..7139) /label=CAP binding site /note="CAP binding activates transcription in the presence of cAMP." rep_origin complement(join(7427..7657,1..358)) /direction=LEFT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication"
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