Basic Vector Information
- Vector Name:
- pcDNA-mBeta-cat-Tcf3
- Length:
- 7657 bp
- Type:
- UNVERIFIED: Cloning vector
- Replication origin:
- ori
- Source/Author:
- Relaix F, Murphy P, Avner P, Duffy DJ.
- Promoter:
- SV40
pcDNA-mBeta-cat-Tcf3 vector Map
pcDNA-mBeta-cat-Tcf3 vector Sequence
LOCUS 40924_9851 7657 bp DNA circular SYN 17-DEC-2018
DEFINITION UNVERIFIED: Cloning vector pcDNA-mBeta-cat-Tcf3, complete sequence.
ACCESSION .
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7657)
AUTHORS Relaix F, Murphy P, Avner P, Duffy DJ.
TITLE MYCN Integrative Omics Reveal Context Dependent Transcriptional
Repressor/Activator Functions and Discover Potential Therapeutic
Targets
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 7657)
AUTHORS Relaix F, Murphy P, Avner P, Duffy DJ.
TITLE Direct Submission
JOURNAL Submitted (11-JUL-2014) Systems Biology Ireland, University College
Dublin, Belfield, Dublin, Leinster 0004, Ireland
REFERENCE 3 (bases 1 to 7657)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 7657)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName:
"Unpublished"
COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(11-JUL-2014) Systems Biology Ireland, University College Dublin,
Belfield, Dublin, Leinster 0004, Ireland"
COMMENT SGRef: number: 3; type: "Journal Article"
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
GenBank staff is unable to verify sequence and/or annotation
provided by the submitter.
FEATURES Location/Qualifiers
source 1..7657
/mol_type="other DNA"
/organism="synthetic DNA construct"
misc_feature complement(827..1206)
/label=ISS
/note="immunostimulatory sequence from the AmpR gene;
contains unmethylated CpG dinucleotides in the context of
5'-AACGTT-3' (Sato et al., 1996)"
promoter complement(1391..1495)
/label=AmpR promoter
enhancer 1761..2140
/label=CMV enhancer
/note="human cytomegalovirus immediate early enhancer"
promoter 2141..2344
/label=CMV promoter
/note="human cytomegalovirus (CMV) immediate early
promoter"
promoter 2389..2407
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
CDS 2440..2463
/codon_start=1
/label=FLAG
/note="FLAG(R) epitope tag, followed by an enterokinase
cleavage site"
/translation="DYKDDDDK"
promoter complement(4707..4725)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
promoter complement(4736..4754)
/label=SP6 promoter
/note="promoter for bacteriophage SP6 RNA polymerase"
polyA_signal 4780..5004
/label=bGH poly(A) signal
/note="bovine growth hormone polyadenylation signal"
rep_origin 5050..5478
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 5492..5821
/label=SV40 promoter
/note="SV40 enhancer and early promoter"
polyA_signal 6855..6988
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
primer_bind complement(7025..7041)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind complement(7049..7065)
/label=lac operator
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(7073..7103)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind complement(7118..7139)
/label=CAP binding site
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(join(7427..7657,1..358))
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
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