pCAGGS-mCASP-6 vector (V008808)

Basic Vector Information

Vector Name:
pCAGGS-mCASP-6
Antibiotic Resistance:
Ampicillin
Length:
6040 bp
Type:
Mammalian expression vector
Replication origin:
ori
Source/Author:
De Schamphelaire W, Olbrechts A, Meert J, Verhelst K, Roggeman Fonseca M, Vanhoucke M, Beyaert R.
Promoter:
CAG

pCAGGS-mCASP-6 vector Map

pCAGGS-mCASP-66040 bp300600900120015001800210024002700300033003600390042004500480051005400570060005UTRCaspase-63UTRbeta-globin poly(A) signalM13 revlac operatorlac promoterCAP binding siteSV40 promoterSV40 poly(A) signaloriAmpRAmpR promoterCMV enhancerchicken beta-actin promoterchimeric intron

pCAGGS-mCASP-6 vector Sequence

LOCUS       V008808                 6040 bp    DNA     circular SYN 17-DEC-2018
DEFINITION  Exported.
ACCESSION   V008808
VERSION     V008808
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
            .
REFERENCE   1  (bases 1 to 6040)
  AUTHORS   De Schamphelaire W, Olbrechts A, Meert J, Verhelst K, Roggeman
            Fonseca M, Vanhoucke M, Beyaert R.
  TITLE     BCCM/LMBP Plasmid collection
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6040)
  AUTHORS   De Schamphelaire W.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2017) BCCM/LMBP, Universiteit Gent,
            Technologiepark 927, 9052, BELGIUM
REFERENCE   3  (bases 1 to 6040)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 6040)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName:
            "Unpublished"
            SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
            (02-FEB-2017) BCCM/LMBP, Universiteit Gent, Technologiepark 927,
            9052, BELGIUM"
            SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..6040
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     misc_feature    12..35
                     /label="5UTR"
                     /note="5UTR"
     CDS             36..863
                     /gene="Casp6"
                     /label="Caspase-6"
                     /note="Caspase-6 from Mus musculus. Accession#: O08738"
     misc_feature    867..1240
                     /label="3UTR"
                     /note="3UTR"
     polyA_signal    1397..1452
                     /label="beta-globin poly(A) signal"
                     /note="rabbit beta-globin polyadenylation signal (Gil and
                     Proudfoot, 1987)"
     primer_bind     complement(1813..1829)
                     /label="M13 rev"
                     /note="common sequencing primer, one of multiple similar
                     variants"
     protein_bind    complement(1837..1853)
                     /label="lac operator"
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be
                     relieved by adding lactose or
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     promoter        complement(1861..1891)
                     /label="lac promoter"
                     /note="promoter for the E. coli lac operon"
     protein_bind    complement(1905..1926)
                     /label="CAP binding site"
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     promoter        1984..2180
                     /label="SV40 promoter"
                     /note="SV40 early promoter"
     polyA_signal    2186..2320
                     /label="SV40 poly(A) signal"
                     /note="SV40 polyadenylation signal"
     rep_origin      complement(2558..3146)
                     /direction=LEFT
                     /label="ori"
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
                     replication"
     CDS             complement(3320..4177)
                     /label="AmpR"
                     /note="beta-lactamase"
     promoter        complement(4178..4282)
                     /label="AmpR promoter"
     enhancer        4313..4692
                     /label="CMV enhancer"
                     /note="human cytomegalovirus immediate early enhancer"
     misc_feature    4313..4690
                     /label="hCMV"
                     /note="hCMV"
     promoter        4694..4971
                     /label="chicken beta-actin promoter"
     intron          4972..5989
                     /label="chimeric intron"
                     /note="chimera between introns from chicken beta-actin and
                     rabbit beta-globin"

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