Basic Vector Information
- Vector Name:
- pC1300intB-35SnosEX
- Antibiotic Resistance:
- Kanamycin
- Length:
- 9937 bp
- Type:
- Cloning vector
- Replication origin:
- ori
- Host:
- Plants
- Source/Author:
- Ouwerkerk PBF., Meijer AH.
- Promoter:
- CaMV 35S (enhanced)
pC1300intB-35SnosEX vector Map
pC1300intB-35SnosEX vector Sequence
LOCUS 40924_7901 9937 bp DNA circular SYN 17-DEC-2018 DEFINITION Cloning vector pC1300intB-35SnosEX, complete sequence. ACCESSION . VERSION . KEYWORDS . SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 9937) AUTHORS Ouwerkerk PBF., Meijer AH. TITLE Binary expression vector for use in plants JOURNAL Unpublished REFERENCE 2 (bases 1 to 9937) AUTHORS Ouwerkerk PBF., Meijer AH. TITLE Direct Submission JOURNAL Submitted (26-FEB-2004) Molecular Cell Biology, Institute of Biology, Leiden University, Wassenaarseweg 64, Leiden 2333 AL, The Netherlands REFERENCE 3 (bases 1 to 9937) TITLE Direct Submission REFERENCE 4 (bases 1 to 9937) AUTHORS . TITLE Direct Submission COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Unpublished" COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted (26-FEB-2004) Molecular Cell Biology, Institute of Biology, Leiden University, Wassenaarseweg 64, Leiden 2333 AL, The Netherlands" COMMENT SGRef: number: 3; type: "Journal Article" FEATURES Location/Qualifiers source 1..9937 /mol_type="other DNA" /organism="synthetic DNA construct" terminator complement(52..304) /label=NOS terminator /note="nopaline synthase terminator and poly(A) signal" misc_feature complement(322..347) /note="multiple cloning site; SpeI, XhoI, EcoRI, SalI are unique" misc_feature complement(349..404) /label=TMV Omega /note="translational enhancer from the tobacco mosaic virus 5'-leader sequence (Gallie et al., 1988)" promoter complement(424..768) /label=CaMV 35S promoter /note="strong constitutive promoter from cauliflower mosaic virus" primer_bind complement(828..844) /label=M13 fwd /note="common sequencing primer, one of multiple similar variants" misc_feature 1047..1071 /label=RB T-DNA repeat /note="right border repeat from nopaline C58 T-DNA" CDS 2371..2997 /label=pVS1 StaA /note="stability protein from the Pseudomonas plasmid pVS1 (Heeb et al., 2000)" CDS 3434..4498 /label=pVS1 RepA /note="replication protein from the Pseudomonas plasmid pVS1 (Heeb et al., 2000)" rep_origin 4567..4761 /label=pVS1 oriV /note="origin of replication for the Pseudomonas plasmid pVS1 (Heeb et al., 2000)" misc_feature 5105..5245 /label=bom /note="basis of mobility region from pBR322" rep_origin complement(5431..6019) /direction=LEFT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" CDS complement(6109..6900) /label=KanR /note="aminoglycoside phosphotransferase" misc_feature 7325..7349 /label=LB T-DNA repeat /note="left border repeat from nopaline C58 T-DNA" polyA_signal complement(7427..7601) /label=CaMV poly(A) signal /note="cauliflower mosaic virus polyadenylation signal" exon complement(7652..8338) /gene="hptII" /number=2 intron complement(8339..8528) /label=cat1 intron /note="castor bean catalase intron, modified" exon complement(8529..8867) /gene="hptII" /number=1 promoter complement(8946..9623) /label=CaMV 35S promoter (enhanced) /note="cauliflower mosaic virus 35S promoter with a duplicated enhancer region" protein_bind 9814..9835 /label=CAP binding site /note="CAP binding activates transcription in the presence of cAMP." promoter 9850..9880 /label=lac promoter /note="promoter for the E. coli lac operon" protein_bind 9888..9904 /label=lac operator /bound_moiety="lac repressor encoded by lacI" /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." primer_bind 9912..9928 /label=M13 rev /note="common sequencing primer, one of multiple similar variants"
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