pC1300intB-35SnosEX vector (V008963)

Basic Vector Information

Vector Name:
pC1300intB-35SnosEX
Antibiotic Resistance:
Kanamycin
Length:
9937 bp
Type:
Cloning vector
Replication origin:
ori
Host:
Plants
Source/Author:
Ouwerkerk PBF., Meijer AH.
Promoter:
CaMV 35S (enhanced)

pC1300intB-35SnosEX vector Map

pC1300intB-35SnosEX9937 bp4008001200160020002400280032003600400044004800520056006000640068007200760080008400880092009600NOS terminatormultiple cloning site; SpeI, XhoI, EcoRI, SalI are uniqueTMV OmegaCaMV 35S promoterM13 fwdRB T-DNA repeatpVS1 StaApVS1 RepApVS1 oriVbomoriKanRLB T-DNA repeatCaMV poly(A) signalexoncat1 intronexonCaMV 35S promoter (enhanced)CAP binding sitelac promoterlac operatorM13 rev

pC1300intB-35SnosEX vector Sequence

LOCUS       40924_7901        9937 bp DNA     circular SYN 17-DEC-2018
DEFINITION  Cloning vector pC1300intB-35SnosEX, complete sequence.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 9937)
  AUTHORS   Ouwerkerk PBF., Meijer AH.
  TITLE     Binary expression vector for use in plants
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 9937)
  AUTHORS   Ouwerkerk PBF., Meijer AH.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-FEB-2004) Molecular Cell Biology, Institute of 
            Biology, Leiden University, Wassenaarseweg 64, Leiden 2333 AL, The 
            Netherlands
REFERENCE   3  (bases 1 to 9937)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 9937)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: 
            "Unpublished"
COMMENT     SGRef: number: 2; type: "Journal Article"; journalName: "Submitted 
            (26-FEB-2004) Molecular Cell Biology, Institute of Biology, Leiden 
            University, Wassenaarseweg 64, Leiden 2333 AL, The Netherlands"
COMMENT     SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..9937
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     terminator      complement(52..304)
                     /label=NOS terminator
                     /note="nopaline synthase terminator and poly(A) signal"
     misc_feature    complement(322..347)
                     /note="multiple cloning site; SpeI, XhoI, EcoRI, SalI are 
                     unique"
     misc_feature    complement(349..404)
                     /label=TMV Omega
                     /note="translational enhancer from the tobacco mosaic virus
                     5'-leader sequence (Gallie et al., 1988)"
     promoter        complement(424..768)
                     /label=CaMV 35S promoter
                     /note="strong constitutive promoter from cauliflower mosaic
                     virus"
     primer_bind     complement(828..844)
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     misc_feature    1047..1071
                     /label=RB T-DNA repeat
                     /note="right border repeat from nopaline C58 T-DNA"
     CDS             2371..2997
                     /label=pVS1 StaA
                     /note="stability protein from the Pseudomonas plasmid pVS1
                     (Heeb et al., 2000)"
     CDS             3434..4498
                     /label=pVS1 RepA
                     /note="replication protein from the Pseudomonas plasmid
                     pVS1 (Heeb et al., 2000)"
     rep_origin      4567..4761
                     /label=pVS1 oriV
                     /note="origin of replication for the Pseudomonas plasmid
                     pVS1 (Heeb et al., 2000)"
     misc_feature    5105..5245
                     /label=bom
                     /note="basis of mobility region from pBR322"
     rep_origin      complement(5431..6019)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     CDS             complement(6109..6900)
                     /label=KanR
                     /note="aminoglycoside phosphotransferase"
     misc_feature    7325..7349
                     /label=LB T-DNA repeat
                     /note="left border repeat from nopaline C58 T-DNA"
     polyA_signal    complement(7427..7601)
                     /label=CaMV poly(A) signal
                     /note="cauliflower mosaic virus polyadenylation signal"
     exon            complement(7652..8338)
                     /gene="hptII"
                     /number=2
     intron          complement(8339..8528)
                     /label=cat1 intron
                     /note="castor bean catalase intron, modified"
     exon            complement(8529..8867)
                     /gene="hptII"
                     /number=1
     promoter        complement(8946..9623)
                     /label=CaMV 35S promoter (enhanced)
                     /note="cauliflower mosaic virus 35S promoter with a
                     duplicated enhancer region"
     protein_bind    9814..9835
                     /label=CAP binding site
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     promoter        9850..9880
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    9888..9904
                     /label=lac operator
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     primer_bind     9912..9928
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"

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