pBSD-GFP-INT-attP vector (V009038)

Basic Vector Information

Vector Name:
pBSD-GFP-INT-attP
Antibiotic Resistance:
Ampicillin
Length:
8184 bp
Type:
Cloning vector
Replication origin:
ori
Source/Author:
Nkrumah LJ, Muhle RA, Moura PA, Ghosh P, Hatfull GF, Jacobs WR Jr., Fidock DA.

pBSD-GFP-INT-attP vector Map

pBSD-GFP-INT-attP8184 bp400800120016002000240028003200360040004400480052005600600064006800720076008000derived from hsp86 3' UTRyeGFPFLAGBSDcontains promoter and 5' UTR from calmodulin genecontains promoter and 5' UTR from PcDT geneMycderived from hrp2 3' UTRattPT7 promoterM13 fwdAmpR promoterAmpRoriCAP binding sitelac promoterlac operatorM13 revSP6 promoter

pBSD-GFP-INT-attP vector Sequence

LOCUS       40924_7391        8184 bp DNA     circular SYN 17-DEC-2018
DEFINITION  Cloning vector pBSD-GFP-INT-attP, complete sequence.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 8184)
  AUTHORS   Nkrumah LJ, Muhle RA, Moura PA, Ghosh P, Hatfull GF, Jacobs WR Jr., 
            Fidock DA.
  TITLE     Efficient site-specific integration in Plasmodium falciparum 
            chromosomes mediated by mycobacteriophage Bxb1 integrase
  JOURNAL   Nat. Methods 3 (8), 615-621 (2006)
  PUBMED    16862136
REFERENCE   2  (bases 1 to 8184)
  AUTHORS   Nkrumah LJ, Moura PA, Fidock DA.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JUN-2006) Microbiology and Immunology, Albert Einstein
            College of Medicine, 1300 Morris Park, Bronx, NY 10461, USA
REFERENCE   3  (bases 1 to 8184)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 8184)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Nat. 
            Methods"; date: "2006"; volume: "3"; issue: "8"; pages: "615-621"
COMMENT     SGRef: number: 2; type: "Journal Article"; journalName: "Submitted 
            (25-JUN-2006) Microbiology and Immunology, Albert Einstein College 
            of Medicine, 1300 Morris Park, Bronx, NY 10461, USA"
COMMENT     SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..8184
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     regulatory      complement(37..865)
                     /label=derived from hsp86 3' UTR
                     /note="derived from hsp86 3' UTR"
                     /regulatory_class="terminator"
     CDS             complement(875..1585)
                     /label=yeGFP
                     /note="yeast-enhanced green fluorescent protein"
     CDS             complement(1592..1615)
                     /label=FLAG
                     /note="FLAG(R) epitope tag, followed by an enterokinase
                     cleavage site"
     misc_feature    complement(1622..2020)
                     /gene="bsd-FLAG-gfp"
                     /label=BSD
                     /note="BSD"
     CDS             complement(1622..2020)
                     /codon_start=1
                     /gene="Aspergillus terreus BSD"
                     /product="blasticidin S deaminase"
                     /label=BSD
                     /note="confers resistance to blasticidin"
                     /translation="MHAKPLSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFT
                     GVNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIGNENRGILSPCGRCRQVLLDLHPG
                     IKAIVKDSDGQPTAVGIRELLPSGYVWEG"
     misc_feature    complement(2036..2659)
                     /label=contains promoter and 5' UTR from calmodulin gene
                     /note="contains promoter and 5' UTR from calmodulin gene"
     misc_feature    2666..3264
                     /label=contains promoter and 5' UTR from PcDT gene
                     /note="contains promoter and 5' UTR from PcDT gene"
     CDS             4799..4828
                     /label=Myc
                     /note="Myc (human c-Myc proto-oncogene) epitope tag"
     regulatory      4838..5428
                     /label=derived from hrp2 3' UTR
                     /note="derived from hrp2 3' UTR"
                     /regulatory_class="terminator"
     misc_recomb     5447..5496
                     /label=attP
                     /note="attP"
     promoter        complement(5502..5519)
                     /label=T7 promoter
                     /note="promoter for bacteriophage T7 RNA polymerase"
     primer_bind     complement(5526..5542)
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     promoter        6016..6120
                     /label=AmpR promoter
     CDS             6121..6978
                     /label=AmpR
                     /note="beta-lactamase"
     rep_origin      7152..7740
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     protein_bind    8028..8049
                     /label=CAP binding site
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     promoter        8064..8094
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    8102..8118
                     /label=lac operator
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     primer_bind     8126..8142
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     promoter        8160..8178
                     /label=SP6 promoter
                     /note="promoter for bacteriophage SP6 RNA polymerase"

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