pAAV-hSyn-mCherry-hSyn-9(5) vector (V009670)

Basic Vector Information

Vector Name:
pAAV-hSyn-mCherry-hSyn-9(5)
Antibiotic Resistance:
Ampicillin
Length:
7278 bp
Type:
Cloning vector
Replication origin:
ori
Source/Author:
Michel U, Muller B, Koch JC, Zhang J-N.
Promoter:
SYN1

pAAV-hSyn-mCherry-hSyn-9(5) vector Map

pAAV-hSyn-mCherry-hSyn-9(5)7278 bp300600900120015001800210024002700300033003600390042004500480051005400570060006300660069007200beta-globin-IgG-chimeric intronhSyn promoterKS primerITRoriAmpRAmpR promoterf1 oriITRbGH poly(A) signalWPREhuman synapsin promoter (hSyn)SV40 poly(A) signalchimeric intronmCherry

pAAV-hSyn-mCherry-hSyn-9(5) vector Sequence

LOCUS       40924_3151        7278 bp DNA     circular SYN 17-DEC-2018
DEFINITION  Cloning vector pAAV-hSyn-mCherry-hSyn-9(5), complete sequence.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 7278)
  AUTHORS   Michel U, Muller B, Koch JC, Zhang J-N.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUL-2015) Neurology, University of Goettingen, Waldweg
            33, Goettingen, Niedersachsen 37073, Germany
REFERENCE   2  (bases 1 to 7278)
  TITLE     Direct Submission
REFERENCE   3  (bases 1 to 7278)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Submitted 
            (29-JUL-2015) Neurology, University of Goettingen, Waldweg 33, 
            Goettingen, Niedersachsen 37073, Germany"
COMMENT     SGRef: number: 2; type: "Journal Article"
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing 
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..7278
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     intron          17..157
                     /note="beta-globin-IgG-chimeric intron"
     intron          20..153
                     /label=chimeric intron
                     /note="chimera between introns from human beta-globin and 
                     immunoglobulin heavy chain genes"
     promoter        complement(193..640)
                     /label=hSyn promoter
                     /note="human synapsin I promoter; confers neuron-specific 
                     expression (Kugler et al., 2003)"
     primer_bind     complement(676..692)
                     /label=KS primer
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     misc_feature    737..879
                     /label=ITR
                     /note="ITR"
     rep_origin      complement(1141..1729)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     CDS             complement(1903..2760)
                     /label=AmpR
                     /note="beta-lactamase"
     promoter        complement(2761..2865)
                     /label=AmpR promoter
     rep_origin      complement(3197..3652)
                     /direction=LEFT
                     /label=f1 ori
                     /note="f1 bacteriophage origin of replication; arrow
                     indicates direction of (+) strand synthesis"
     misc_feature    3753..3896
                     /label=ITR
                     /note="ITR"
     polyA_signal    complement(3906..4113)
                     /label=bGH poly(A) signal
                     /note="bovine growth hormone polyadenylation signal"
     misc_feature    complement(4155..4743)
                     /label=WPRE
                     /note="woodchuck hepatitis virus posttranscriptional
                     regulatory element"
     regulatory      5731..6210
                     /label=human synapsin promoter (hSyn)
                     /note="human synapsin promoter (hSyn)"
                     /regulatory_class="promoter"
     promoter        complement(5737..6184)
                     /label=hSyn promoter
                     /note="human synapsin I promoter; confers neuron-specific 
                     expression (Kugler et al., 2003)"
     polyA_signal    complement(6250..6384)
                     /label=SV40 poly(A) signal
                     /note="SV40 polyadenylation signal"
     intron          complement(6400..6533)
                     /label=chimeric intron
                     /note="chimera between introns from human beta-globin and 
                     immunoglobulin heavy chain genes"
     CDS             complement(6552..7259)
                     /label=mCherry
                     /note="monomeric derivative of DsRed fluorescent protein
                     (Shaner et al., 2004)"

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