041 pLVPTH2-tTR-KRAB-Cerulean vector (V013101)

Price Information

Cat No. Plasmid Name Availability Add to cart
V013101 041 pLVPTH2-tTR-KRAB-Cerulean In stock, 1 week for quality controls

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Two tubes of lyophilized plasmid will be delivered, each tube is about 5µg.

Basic Vector Information

Vector Name:
041 pLVPTH2-tTR-KRAB-Cerulean
Antibiotic Resistance:
Ampicillin
Length:
12015 bp
Type:
RNA interference
Replication origin:
ori
Host:
Mammalian cells, Lentivirus
Promoter:
mPGK
Growth Strain(s):
Stbl3
Growth Temperature:
37℃

041 pLVPTH2-tTR-KRAB-Cerulean vector Map

041 pLVPTH2-tTR-KRAB-Cerulean12015 bp600120018002400300036004200480054006000660072007800840090009600102001080011400120003' LTRHIV-1 PsiRREgp41 peptideProtein TatcPPT/CTSPGK promotermCeruleanattB2IRESTetRSV40 NLSKRABWPREtetracycline response elementH1 promoter5' LTR (truncated)SP6 promoterAmpR promoterAmpRoriSV40 promotersmall t intronSV40 NLSSV40 poly(A) signal

Plasmid Protocol

1. Centrifuge at 5,000×g for 5 min.

2. Carefully open the tube and add 20 μl of sterile water to dissolve the DNA.

3. Close the tube and incubate for 10 minutes at room temperature.

4. Briefly vortex the tube and then do a quick spin to concentrate the liquid at the bottom. Speed is less than 5000×g.

5. Store the plasmid at -20 ℃.

6. The concentration of plasmid re-measurement sometimes differs from the nominal value, which may be due to the position of the lyophilized plasmid in the tube, the efficiency of the re-dissolution, the measurement bias, and adsorption on the wall of the tube, therefore, it is recommended to transform and extract the plasmid before using it

General Plasmid Transform Protocol

1. Take one 100μl of the competent cells and thaw it on ice for 10min, add 2μl of plasmid, then ice bath for 30min, then heat-shock it at 42℃ for 60s, do not stir, and then ice bath for 2min.

2. Add 900μl of LB liquid medium without antibiotics, and incubate at 37℃ for 45min (30℃ for 1-1.5 hours) with 180rpm shaking.

3. Centrifuge at 6000rpm for 5min, leave only 100μl of supernatant to resuspend the bacterial precipitate and spread it onto the target plasmid-resistant LB plate.

4. Invert the plate and incubate at 37℃ for 14h, or at 30℃ for 20h.

5. Pick a single colony into LB liquid medium, add the corresponding antibiotics, incubate at 220rpm for 14h, and extract the plasmid according to the experimental needs and the instructions of the plasmid extraction kit.

041 pLVPTH2-tTR-KRAB-Cerulean vector Sequence

LOCUS       V013101                12015 bp    DNA     circular SYN 01-JAN-1980
DEFINITION  Exported.
ACCESSION   V013101
VERSION     V013101
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
            .
REFERENCE   1  (bases 1 to 12015)
  AUTHORS   .
  TITLE     Direct Submission
FEATURES             Location/Qualifiers
     source          1..12015
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     LTR             1..634
                     /label="3' LTR"
                     /note="3' long terminal repeat (LTR) from HIV-1"
     misc_feature    681..806
                     /label="HIV-1 Psi"
                     /note="packaging signal of human immunodeficiency virus
                     type 1"
     misc_feature    1299..1532
                     /label="RRE"
                     /note="The Rev response element (RRE) of HIV-1 allows for
                     Rev-dependent mRNA export from the nucleus to the
                     cytoplasm."
     CDS             1717..1761
                     /label="gp41 peptide"
                     /note="antigenic peptide corresponding to amino acids 655
                     to 669 of the HIV envelope protein gp41 (Lutje Hulsik et
                     al., 2013)"
     CDS             1910..1951
                     /note="Protein Tat from Human immunodeficiency virus type 1
                     group M subtype B (isolate WMJ22). Accession#: P12509"
                     /label="Protein Tat"
     misc_feature    2028..2145
                     /label="cPPT/CTS"
                     /note="central polypurine tract and central termination
                     sequence of HIV-1"
     promoter        2184..2683
                     /label="PGK promoter"
                     /note="mouse phosphoglycerate kinase 1 promoter"
     CDS             2746..3462
                     /label="mCerulean"
                     /note="enhanced monomeric variant of CFP (Rizzo et al.,
                     2004)"
     protein_bind    complement(3467..3491)
                     /label="attB2"
                     /note="recombination site for the Gateway(R) BP reaction"
     misc_feature    3512..4074
                     /label="IRES"
                     /note="internal ribosome entry site (IRES) of the
                     encephalomyocarditis virus (EMCV)"
     CDS             4079..4699
                     /label="TetR"
                     /note="tetracycline repressor TetR"
     CDS             4700..4720
                     /label="SV40 NLS"
                     /note="nuclear localization signal of SV40 (simian virus
                     40) large T antigen"
     CDS             4823..5017
                     /label="KRAB"
                     /note="Kruppel-associated box (KRAB) transcriptional
                     repression domain from the human zinc finger protein ZNF10
                     (Margolin et al., 1994)"
     misc_feature    5187..5775
                     /label="WPRE"
                     /note="woodchuck hepatitis virus posttranscriptional
                     regulatory element"
     protein_bind    5913..6183
                     /label="tetracycline response element"
                     /note="contains seven copies of the tetracycline operator
                     tetO"
     promoter        6374..6586
                     /label="H1 promoter"
                     /note="human H1 RNA promoter"
     LTR             6629..6809
                     /label="5' LTR (truncated)"
                     /note="truncated 5' long terminal repeat (LTR) from HIV-1"
     promoter        complement(6834..6852)
                     /label="SP6 promoter"
                     /note="promoter for bacteriophage SP6 RNA polymerase"
     promoter        7640..7744
                     /label="AmpR promoter"
     CDS             7745..8602
                     /label="AmpR"
                     /note="beta-lactamase"
     rep_origin      8776..9364
                     /direction=RIGHT
                     /label="ori"
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
                     replication"
     promoter        9610..9939
                     /label="SV40 promoter"
                     /note="SV40 enhancer and early promoter"
     intron          11073..11138
                     /label="small t intron"
                     /note="SV40 (simian virus 40) small t antigen intron"
     CDS             11268..11288
                     /label="SV40 NLS"
                     /note="nuclear localization signal of SV40 (simian virus
                     40) large T antigen"
     polyA_signal    11713..11847
                     /label="SV40 poly(A) signal"
                     /note="SV40 polyadenylation signal"