pEBTet_NAD-Snifit-mito vector (V000401)

Price Information

Cat No. Plasmid Name Availability Add to cart
V000401 pEBTet_NAD-Snifit-mito In stock, 1 week for quality controls

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Two tubes of lyophilized plasmid will be delivered, each tube is about 5µg.

Basic Vector Information

Vector Name:
pEBTet_NAD-Snifit-mito
Antibiotic Resistance:
Ampicillin
Length:
14157 bp
Type:
Mammalian Expression
Replication origin:
ori
Selection Marker:
Puromycin
Copy Number:
High Copy
Promoter:
RSV
Cloning Method:
Gibson Cloning
5' Primer:
CMV_Fwd
3' Primer:
BGH_Rev

pEBTet_NAD-Snifit-mito vector Map

pEBTet_NAD-Snifit-mito14157 bp7001400210028003500420049005600630070007700840091009800105001120011900126001330014000COX8 presequenceCOX8 presequenceCOX8 presequenceCOX8 presequenceSepiapterin reductaseHaloTag(R)SNAP-tag(R)bGH poly(A) signaloriPpBRforEcoAmpR promoterAmpRoripBABE 3'SV40 oriPuroRSV40 poly(A) signalpRS-markerRSV promoterbeta-globin intronpCAG-FT7 promoterTetRSV40 poly(A) signalCMV enhancerCMV promotertet operatortet operatorLNCX

Plasmid Protocol

1. Centrifuge at 5,000×g for 5 min.

2. Carefully open the tube and add 20 μl of sterile water to dissolve the DNA.

3. Close the tube and incubate for 10 minutes at room temperature.

4. Briefly vortex the tube and then do a quick spin to concentrate the liquid at the bottom. Speed is less than 5000×g.

5. Store the plasmid at -20 ℃.

6. The concentration of plasmid re-measurement sometimes differs from the nominal value, which may be due to the position of the lyophilized plasmid in the tube, the efficiency of the re-dissolution, the measurement bias, and adsorption on the wall of the tube, therefore, it is recommended to transform and extract the plasmid before using it

General Plasmid Transform Protocol

1. Take one 100μl of the competent cells and thaw it on ice for 10min, add 2μl of plasmid, then ice bath for 30min, then heat-shock it at 42℃ for 60s, do not stir, and then ice bath for 2min.

2. Add 900μl of LB liquid medium without antibiotics, and incubate at 37℃ for 45min (30℃ for 1-1.5 hours) with 180rpm shaking.

3. Centrifuge at 6000rpm for 5min, leave only 100μl of supernatant to resuspend the bacterial precipitate and spread it onto the target plasmid-resistant LB plate.

4. Invert the plate and incubate at 37℃ for 14h, or at 30℃ for 20h.

5. Pick a single colony into LB liquid medium, add the corresponding antibiotics, incubate at 220rpm for 14h, and extract the plasmid according to the experimental needs and the instructions of the plasmid extraction kit.

pEBTet_NAD-Snifit-mito vector Sequence

LOCUS       V000401                14157 bp    DNA     circular SYN 13-MAY-2021
DEFINITION  Exported.
ACCESSION   V000401
VERSION     V000401
KEYWORDS    pEBTet_NAD-Snifit-mito
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
            .
REFERENCE   1  (bases 1 to 14157)
  AUTHORS   Sallin O, Reymond L, Gondrand C, Raith F, Koch B, Johnsson K
  TITLE     Semisynthetic biosensors for mapping cellular concentrations of
            nicotinamide adenine dinucleotides.
  JOURNAL   Elife. 2018 May 29;7. pii: 32638. doi: 10.7554/eLife.32638.
   PUBMED   29809136
REFERENCE   2  (bases 1 to 14157)
  TITLE     Direct Submission
REFERENCE   3  (bases 1 to 14157)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Elife.";
            date: "2018-05-29"; pages: "
            10.7554/eLife.32638"
            SGRef: number: 2; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..14157
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     CDS             12..86
                     /label="COX8 presequence"
                     /note="mitochondrial presequence of human cytochrome c
                     oxidase subunit VIII (Rizutto et al., 1989)"
     CDS             99..170
                     /codon_start=1
                     /product="mitochondrial presequence of human cytochrome c
                     oxidase subunit VIII (Rizutto et al., 1989)"
                     /label="COX8 presequence"
                     /translation="SVLTPLLLRGLTGSARRLPVPRAK"
     CDS             189..260
                     /codon_start=1
                     /product="mitochondrial presequence of human cytochrome c
                     oxidase subunit VIII (Rizutto et al., 1989)"
                     /label="COX8 presequence"
                     /translation="SVLTPLLLRGLTGSARRLPVPRAK"
     CDS             273..344
                     /codon_start=1
                     /product="mitochondrial presequence of human cytochrome c
                     oxidase subunit VIII (Rizutto et al., 1989)"
                     /label="COX8 presequence"
                     /translation="SVLTPLLLRGLTGSARRLPVPRAK"
     CDS             375..1154
                     /gene="SPR"
                     /label="Sepiapterin reductase"
                     /note="Sepiapterin reductase from Homo sapiens. Accession#:
                     P35270"
     CDS             1164..2051
                     /label="HaloTag(R)"
                     /note="modified bacterial dehalogenase that forms covalent
                     bonds with chloroalkane derivatives"
     CDS             2175..2720
                     /label="SNAP-tag(R)"
                     /note="human O6-alkylguanine-DNA-alkyltransferase variant
                     that forms covalent bonds with benzylguanine derivatives"
     polyA_signal    2788..2899
                     /label="bGH poly(A) signal"
                     /note="bovine growth hormone polyadenylation signal"
     rep_origin      3440..5229
                     /label="oriP"
                     /note="Epstein-Barr virus oriP replication origin (Yates et
                     al., 2000)"
     primer_bind     complement(7893..7911)
                     /label="pBRforEco"
                     /note="pBR322 vectors, upsteam of EcoRI site, forward
                     primer"
     promoter        7979..8083
                     /label="AmpR promoter"
     CDS             8084..8941
                     /label="AmpR"
                     /note="beta-lactamase"
     rep_origin      9115..9703
                     /label="ori"
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
                     replication"
     primer_bind     complement(9892..9912)
                     /label="pBABE 3'"
                     /note="SV40 enhancer, reverse primer for pBABE vectors"
     rep_origin      10077..10210
                     /label="SV40 ori"
                     /note="SV40 origin of replication"
     CDS             10284..10880
                     /label="PuroR"
                     /note="puromycin N-acetyltransferase"
     polyA_signal    10974..11108
                     /label="SV40 poly(A) signal"
                     /note="SV40 polyadenylation signal"
     primer_bind     complement(11246..11265)
                     /label="pRS-marker"
                     /note="pRS vectors, use to sequence yeast selectable
                     marker"
     promoter        11542..11803
                     /label="RSV promoter"
                     /note="Rous sarcoma virus enhancer/promoter"
     intron          11920..12492
                     /label="beta-globin intron"
                     /note="intron from rabbit beta-globin gene"
     primer_bind     12500..12519
                     /label="pCAG-F"
                     /note="Rabbit beta-globin intron, for pCAG plasmids,
                     forward primer"
     promoter        12547..12565
                     /label="T7 promoter"
                     /note="promoter for bacteriophage T7 RNA polymerase"
     CDS             12576..13196
                     /label="TetR"
                     /note="tetracycline repressor TetR"
     polyA_signal    13238..13359
                     /label="SV40 poly(A) signal"
                     /note="SV40 polyadenylation signal"
     enhancer        13414..13793
                     /label="CMV enhancer"
                     /note="human cytomegalovirus immediate early enhancer"
     promoter        13794..13997
                     /label="CMV promoter"
                     /note="human cytomegalovirus (CMV) immediate early
                     promoter"
     protein_bind    13999..14017
                     /label="tet operator"
                     /note="bacterial operator O2 for the tetR and tetA genes"
     protein_bind    14020..14038
                     /gene="tetO"
                     /label="tet operator"
                     /bound_moiety="tetracycline repressor TetR"
                     /note="bacterial operator O2 for the tetR and tetA genes"
     primer_bind     14048..14072
                     /label="LNCX"
                     /note="Human CMV promoter, forward primer"