pCVD048 vector (V001539)

Basic Vector Information

Vector Name:
pCVD048
Antibiotic Resistance:
Ampicillin
Length:
5653 bp
Type:
Broad host range vector
Replication origin:
ori
Source/Author:
Taton A, Unglaub F, Wright NE, Zeng WY, Paz-Yepez J, Brahamsha B, Palenik B, Peterson TC, Haerizadeh F, Golden SS, Golden JW.

pCVD048 vector Map

pCVD0485653 bp60012001800240030003600420048005400CVD-CYA; device for the GC-adaptor assembly: cyanobacterial repliconsoriAmpRAmpR promoter

pCVD048 vector Sequence

LOCUS       40924_49222        5653 bp DNA     circular SYN 18-DEC-2018
DEFINITION  Broad host range vector vector pCVD048, complete sequence.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 5653)
  AUTHORS   Taton A, Unglaub F, Wright NE, Zeng WY, Paz-Yepez J, Brahamsha B, 
            Palenik B, Peterson TC, Haerizadeh F, Golden SS, Golden JW.
  TITLE     Broad-host-range vector system for synthetic biology and 
            biotechnology in cyanobacteria
  JOURNAL   Nucleic Acids Res. (2014) In press
  PUBMED    25074377
REFERENCE   2  (bases 1 to 5653)
  AUTHORS   Taton A, Unglaub F, Wright N, Zeng WY, Paz Yepes J, Brahamsha B, 
            Palenik B, Peterson T, Haerizadeh F, Golden SS, Golden JW.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JUN-2014) Division of Biological Sciences, University 
            of California, San Diego, 9500 Gilman Dr., La Jolla, CA 92093, USA
REFERENCE   3  (bases 1 to 5653)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 5653)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Nucleic 
            Acids Res. (2014) In press"
COMMENT     SGRef: number: 2; type: "Journal Article"; journalName: "Submitted 
            (17-JUN-2014) Division of Biological Sciences, University of 
            California, San Diego, 9500 Gilman Dr., La Jolla, CA 92093, USA"
COMMENT     SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..5653
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     misc_feature    29..34
                     /label=ZraI
                     /note="ZraI"
     misc_feature    32..3844
                     /note="CVD-CYA; device for the GC-adaptor assembly: 
                     cyanobacterial replicons"
     misc_feature    32..52
                     /note="G5C5; GC-adaptor for seamless assembly, flanking a
                     BHR replicons, neutral sites, or cyanobacterial replicons; 
                     synthetic"
     misc_feature    53..58
                     /label=XbaI
                     /note="XbaI"
     CDS             complement(257..730)
                     /codon_start=1
                     /product="repB"
                     /label=repB
                     /note="repB-pANS; #1 amino acid V to M; similar to INSD 
                     accession AAB21874; Synechococcus elongatus PCC7942"
                     /protein_id="AII99712.1"
                     /translation="MGSCIAPQVRYLHGLKVEELLQRRDWFSVDDPLIQEIVTTATSHR
                     ASAAQILKIQITDKTRASTIVRALLRMIGFKLKARQKRIAGKSTWIYQVVPNEAIAELP
                     LEAIEAHWLENARSSQGLGSCHEIPNRRSKPITAHFRDTASGQVSTTSTETAA"
     CDS             complement(685..3315)
                     /codon_start=1
                     /product="repA"
                     /label=repA
                     /note="repA-pANS; similar to INSD accession AAB21875; 
                     Synechococcus elongatus PCC7942"
                     /protein_id="AII99713.1"
                     /translation="MAFIANHLQRSQIPTRCELIDQLDRLPPNWRFCVVNSRKAPFDPG
                     WQNNPLDHAAVAERIRSDRRVTGIGLLTGPASGGLIAVDFDGPTAHEALPEGLTLTELP
                     PTVAYTSGKPGRHQRLYQVPQERWAAIATQKLHSPDGDLLELRWNKLQSVIVGQHPETG
                     AYRWVEGCAPWEIEVAEAPPELLDAMERQDRQTAPKSYKPIVSAPASDDEVAIARTMLA
                     HVPASYADDYESWVAVGMALQSVSDALLDDWIAWSAQSSKFDGNRKLERKWASFKGSGI
                     TIATLAKLAKEGGYRPPKLTRQEQREYQREVANEWQRLTRSPNRLHTGGYINGDYIPQP
                     EQHRLVCLNAAMGTGKTEAIAGHLQPLIGTGIPVVLITHRRTLGAALGKRLGVPWAEEC
                     VPGSDLRMIGLGGCLDSMHPASKLRFSAHGWQRAIVVIDEVELWAEHLLSGKTEIAKHR
                     PEVMAEIAGLLAGGRQVIAADAMLSDVSIALLEALTGSTAYLVSSTVQPFSGAPVYQVG
                     SDRELMAMAVEMVQAGKRLAVFCDRQKLSQSRPSLYSAATIAQQLSEACGQPVPVIDSE
                     ANKRGALETLKLNPQMFINCCPHLVFTSVIDAGLSITQGVGDRPFDAVLIFAGAGHIAP
                     GAIAQIAGRVRSNVPRFITCPDTSNLMRAGNGSIDPTEVADGLKRHQQVILAQLSQAAI
                     KIGEPVASQAYLTAWAELAARRNRDGLTYAATVEQLLRLNGFTWQDWDGAIDPFLQEVV
                     DELQRETAEALADASAEAILSSPDLTPKEAEAIASADFANAEQLAALARHRCQQRWGDC
                     TRELLAADDDGLYAPLRLLFWLSLGKDAVPLAMPPSSTNGAIARCSDPILWAAVSRPKC
                     GTCMG"
     misc_feature    3818..3823
                     /label=SacI
                     /note="SacI"
     misc_feature    3824..3844
                     /note="C3G3; GC-adaptor for seamless assembly, flanking 
                     cyanobacterial replicons; synthetic"
     misc_feature    3842..3847
                     /label=ZraI
                     /note="ZraI"
     rep_origin      complement(3929..4517)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     CDS             complement(4691..5548)
                     /label=AmpR
                     /note="beta-lactamase"
     promoter        complement(5549..5653)
                     /label=AmpR promoter

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