pTY13 vector (V002489)

Basic Vector Information

Vector Name:
pTY13
Antibiotic Resistance:
Kanamycin
Length:
7684 bp
Type:
Cloning vector
Replication origin:
p15A ori
Source/Author:
Kim B, Binkley R, Kim HU, Lee SY.
Promoter:
trc

pTY13 vector Map

pTY137684 bp3006009001200150018002100240027003000330036003900420045004800510054005700600063006600690072007500trc promoterlac operatorCyclohexadienyl dehydrogenaserrnB T1 terminatorrrnB T2 terminatortac promoterlac operatorPhospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitiveShikimate kinase 2rrnBT1T2rrnB T1 terminatorrrnB T2 terminatorAmpR promoterM13 fwdKanRp15A oriTac promoterlac operator

pTY13 vector Sequence

LOCUS       V002489                 7684 bp    DNA     circular SYN 18-DEC-2018
DEFINITION  Exported.
ACCESSION   V002489
VERSION     V002489
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
            .
REFERENCE   1  (bases 1 to 7684)
  AUTHORS   Kim B, Binkley R, Kim HU, Lee SY.
  TITLE     Metabolic engineering of Escherichia coli for the enhanced
            production of l-tyrosine
  JOURNAL   Biotechnol. Bioeng. (2018) In press
   PUBMED   30019750
REFERENCE   2  (bases 1 to 7684)
  AUTHORS   Yang D, Kim WJ, Yoo SM, Choi JH, Ha SH, Lee MH, Lee SY.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUN-2018) Dept. Chemical and Biomolecular Engineering,
            Korea Advanced Institute of Science and Technology, Daehak-ro 291,
            Daejeon 34141, South Korea
REFERENCE   3  (bases 1 to 7684)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 7684)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Biotechnol.
            Bioeng. (2018) In press"
            SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
            (15-JUN-2018) Dept. Chemical and Biomolecular Engineering, Korea
            Advanced Institute of Science and Technology, Daehak-ro 291, Daejeon
            34141, South Korea"
            SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..7684
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     promoter        70..99
                     /label="trc promoter"
                     /note="strong E. coli promoter; hybrid between the trp and
                     lac UV5 promoters"
     protein_bind    107..123
                     /label="lac operator"
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be
                     relieved by adding lactose or
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     CDS             143..1021
                     /gene="tyrC"
                     /label="Cyclohexadienyl dehydrogenase"
                     /note="Cyclohexadienyl dehydrogenase from Zymomonas mobilis
                     subsp. mobilis (strain ATCC 31821 / ZM4 / CP4). Accession#:
                     Q04983"
     terminator      1277..1363
                     /label="rrnB T1 terminator"
                     /note="transcription terminator T1 from the E. coli rrnB
                     gene"
     terminator      1455..1482
                     /label="rrnB T2 terminator"
                     /note="transcription terminator T2 from the E. coli rrnB
                     gene"
     promoter        1547..1575
                     /label="tac promoter"
                     /note="strong E. coli promoter; hybrid between the trp and
                     lac UV5 promoters"
     protein_bind    1583..1599
                     /label="lac operator"
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be
                     relieved by adding lactose or
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     CDS             1622..2671
                     /gene="aroG"
                     /label="Phospho-2-dehydro-3-deoxyheptonate aldolase,
                     Phe-sensitive"
                     /note="Phospho-2-dehydro-3-deoxyheptonate aldolase,
                     Phe-sensitive from Escherichia coli (strain K12).
                     Accession#: P0AB91"
     CDS             2712..3233
                     /gene="aroL"
                     /label="Shikimate kinase 2"
                     /note="Shikimate kinase 2 from Escherichia coli (strain
                     55989 / EAEC). Accession#: B7L543"
     regulatory      3337..3662
                     /label="rrnBT1T2"
                     /note="rrnBT1T2"
                     /regulatory_class="terminator"
     terminator      3457..3543
                     /gene="Escherichia coli rrnB"
                     /label="rrnB T1 terminator"
                     /note="transcription terminator T1 from the E. coli rrnB
                     gene"
     terminator      3635..3662
                     /label="rrnB T2 terminator"
                     /note="transcription terminator T2 from the E. coli rrnB
                     gene"
     terminator      complement(3978..4021)
                     /label="rrnB T1 terminator"
                     /note="transcription terminator T1 from the E. coli rrnB
                     gene"
     terminator      4153..4180
                     /label="rrnB T2 terminator"
                     /note="transcription terminator T2 from the E. coli rrnB
                     gene"
     promoter        4200..4291
                     /label="AmpR promoter"
     primer_bind     complement(4604..4620)
                     /label="M13 fwd"
                     /note="common sequencing primer, one of multiple similar
                     variants"
     CDS             4863..5675
                     /label="KanR"
                     /note="aminoglycoside phosphotransferase"
     rep_origin      6437..6982
                     /label="p15A ori"
                     /note="Plasmids containing the medium-copy-number p15A
                     origin of replication can be propagated in E. coli cells
                     that contain a second plasmid with the ColE1 origin."
     regulatory      7618..7646
                     /label="Tac promoter"
                     /note="Tac promoter"
                     /regulatory_class="promoter"
     promoter        7618..7646
                     /label="tac promoter"
                     /note="strong E. coli promoter; hybrid between the trp and
                     lac UV5 promoters"
     protein_bind    7654..7670
                     /label="lac operator"
                     /bound_moiety="lac repressor encoded by lacI"
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be
                     relieved by adding lactose or
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."

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