Basic Vector Information
- Vector Name:
- pTRK1-bglT2mcsHEstop
- Antibiotic Resistance:
- Ampicillin
- Length:
- 9207 bp
- Type:
- Reporter vector
- Replication origin:
- ori
- Source/Author:
- Vian A, Carrascosa AV, Garcia JL, Cortes E.
pTRK1-bglT2mcsHEstop vector Map
pTRK1-bglT2mcsHEstop vector Sequence
LOCUS V002525 9207 bp DNA circular SYN 18-DEC-2018
DEFINITION Exported.
ACCESSION V002525
VERSION V002525
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 9207)
AUTHORS Vian A, Carrascosa AV, Garcia JL, Cortes E.
TITLE Structure of the beta-galactosidase gene from Thermus sp. strain T2:
expression in Escherichia coli and purification in a single step of
an active fusion protein
JOURNAL Appl. Environ. Microbiol. 64 (6), 2187-2191 (1998)
PUBMED 9603833
REFERENCE 2 (bases 1 to 9207)
AUTHORS Fujita A, Misumi Y, Koyama Y.
TITLE Two versatile shuttle vectors for Thermus thermophilus-Escherichia
coli containing multiple cloning sites, lacZalpha gene and kanamycin
or hygromycin resistance marker
JOURNAL Plasmid 67 (3), 272-275 (2012)
PUBMED 22252135
REFERENCE 3 (bases 1 to 9207)
AUTHORS Fujita A, Misumi Y, Honda S, Sato T, Koyama Y.
TITLE Construction of new cloning vectors that employ the phytoene
synthase encoding gene for color screening of cloned DNA inserts in
Thermus thermophilus
JOURNAL Gene 527 (2), 655-662 (2013)
PUBMED 23845779
REFERENCE 4 (bases 1 to 9207)
AUTHORS Fujita A, Sato T, Koyama Y, Misumi Y.
TITLE Development of a novel reporter gene system incorporating a gene
encoding a thermostable beta-galactosidase for use in Thermus
thermophilus HB27
JOURNAL Unpublished
REFERENCE 5 (bases 1 to 9207)
AUTHORS Fujita A.
TITLE Direct Submission
JOURNAL Submitted (27-JAN-2015) Contact:Atsushi Fujita National Institute of
Advanced Industrial Science and Technology, Health Research
Institute; 1-8-31 Midorigaoka, Ikeda, Osaka 563-8577, Japan URL
:https://unit.aist.go.jp/hri/
REFERENCE 6 (bases 1 to 9207)
TITLE Direct Submission
REFERENCE 7 (bases 1 to 9207)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Appl.
Environ. Microbiol."; date: "1998"; volume: "64"; issue: "6"; pages:
"2187-2191"
SGRef: number: 2; type: "Journal Article"; journalName: "Plasmid";
date: "2012"; volume: "67"; issue: "3"; pages: "272-275"
SGRef: number: 3; type: "Journal Article"; journalName: "Gene";
date: "2013"; volume: "527"; issue: "2"; pages: "655-662"
SGRef: number: 4; type: "Journal Article"; journalName:
"Unpublished"
SGRef: number: 5; type: "Journal Article"; journalName: "Submitted
(27-JAN-2015) Contact:Atsushi Fujita National Institute of Advanced
Industrial Science and Technology, Health Research Institute; 1-8-31
Midorigaoka, Ikeda, Osaka 563-8577, Japan URL
:https://unit.aist.go.jp/hri/"
SGRef: number: 6; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..9207
/mol_type="other DNA"
/organism="synthetic DNA construct"
misc_feature 69..123
/note="polylinker
HindIII-NruI-SalI-NotI-PstI-SwaI-EcoRV-PvuII-EcoRI"
CDS 137..2071
/gene="bgaA"
/label="Beta-galactosidase BgaA"
/note="Beta-galactosidase BgaA from Thermus sp. Accession#:
O54315"
CDS complement(2922..4085)
/codon_start=1
/gene="repA"
/product="putative repA protein"
/label="repA"
/protein_id="BAS05947.1"
/translation="MVLRAYAALRGLSPEALRAHLLAPPLRPERAREAFQRPYLAHFAQ
TLPRYPYATDDPKEGVRIYKRENALKRVHVQVGHYPHAVLRLVVDVDLPWPQVEERIHA
LPPSLVLVNPRSGHFHAWYELDPIPLTPPPGREGSLKGALALLAEVEALLEAYYGADPG
YNGLLSRNPFLHPPEWTWGGGKRWSLRDLHRELRGLLPSGTRRRVDPGLASYGRNNALF
DRLRAEAYAHVALFRGVPGGEEAFRAWVEQRAHALNQSLFRDHPKGPLDPREVHHTAKS
VAKWTYRNYRGARVYPVSSTGRPDRSRLSPQARALIPPLQGQELQEAVREGGRRRGSRR
RQEAEEKLTEALKRLQARGERVTARALAREAGVKPHTASKWLKRMRE"
gene complement(2922..4085)
/gene="repA"
/label="repA"
CDS 6577..7347
/codon_start=1
/gene="KNT"
/product="kanamycin nucleotidyltransferase"
/label="KNT"
/protein_id="BAS05948.1"
/translation="MRIVNGPIIMTREERMKIVHEIKERILDKYGDDVKAIGVYGSLGR
QTDGPYSDIEMMCVMSTEEAEFSHEWTTGEWKAEVNFYSEEILLDYASRVEPDWPLTHG
RFFSILPIYDPGGYFEKVYQTAKSVEAQKFHDAICALIVEELFEYAGKWRNIRVQGPTT
FLPSLTVQVAMAGAMLIGLHHRICYTTSASVLTEAVKQPDLPPGYVQLCQLVMSGQLSD
PEKLLESLENFWNGIQEWTERHGYIVDVSKRIPF"
gene 6577..7347
/gene="KNT"
/label="KNT"
CDS 7406..8263
/label="AmpR"
/note="beta-lactamase"
rep_origin 8437..9025
/direction=RIGHT
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
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