Basic Vector Information
- Vector Name:
- PiggyBac-shRNA
- Antibiotic Resistance:
- Ampicillin
- Length:
- 7156 bp
- Type:
- RNAi, Transposition
- Replication origin:
- ori
- Host:
- Mammalian cells
- Selection Marker:
- Puro
- Promoter:
- EF1a
- 3' Primer:
- EF1a-R
- Growth Strain(s):
- Stbl3
- Growth Temperature:
- 37℃
PiggyBac-shRNA vector Map
PiggyBac-shRNA vector Sequence
LOCUS . 7156 bp DNA circular UNK 01-JAN-1980
DEFINITION synthetic circular DNA.
ACCESSION
VERSION
KEYWORDS .
SOURCE .
ORGANISM .
.
FEATURES Location/Qualifiers
promoter complement(1..105)
/label="AmpR promoter"
rep_origin complement(131..586)
/label="f1 ori"
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 728..744
/label="M13 fwd"
/note="common sequencing primer, one of multiple similar
variants"
promoter 1426..1637
/label="EF-1α core promoter"
/note="core promoter for human elongation factor EF-1α"
LTR 1650..1918
/label="5' LTR (truncated)"
/note="truncated 5' long terminal repeat (LTR) from human
T-cell leukemia virus (HTLV) type 1"
CDS 1974..2639
/label="CopGFP"
/note="green fluorescent protein 2 from Pontellina plumata,
also known as ppluGFP2 (Shagin et al., 2004)"
CDS 2709..2762
/label="T2A"
/note="2A peptide from Thosea asigna virus capsid protein"
CDS 2763..3359
/label="PuroR"
/note="puromycin N-acetyltransferase"
polyA_signal 3470..3602
/label="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"
promoter 4079..4293
/label="H1 promoter"
/note="human H1 RNA promoter"
primer_bind complement(5135..5151)
/label="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
protein_bind complement(5159..5175)
/label="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-β-D-thiogalactopyranoside (IPTG)."
promoter complement(5183..5213)
/label="lac promoter"
/note="promoter for the E. coli lac operon"
protein_bind complement(5228..5249)
/label="CAP binding site"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(5537..6125)
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(6299..7156)
/label="AmpR"
/note="β-lactamase"
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