Nme2sgRNA_pLKO vector (V017475)

Price Information

Cat No. Plasmid Name Availability Add to cart
V017475 Nme2sgRNA_pLKO In stock, 1 week for quality controls

Buy one, get one free!

Two tubes of lyophilized plasmid will be delivered, each tube is about 5µg.

Basic Vector Information

Vector Name:
Nme2sgRNA_pLKO
Antibiotic Resistance:
Ampicillin
Length:
9023 bp
Type:
Gene knockout
Replication origin:
ori
Host:
Mammalian cells, Lentivirus
Selection Marker:
Puro
Promoter:
hPGK
Growth Strain(s):
Stbl3
Growth Temperature:
37℃

Nme2sgRNA_pLKO vector Map

Nme2sgRNA_pLKO9023 bp40080012001600200024002800320036004000440048005200560060006400680072007600800084008800oriAmpRAmpR promoterf1 oriM13 fwdT7 promoterSV40 oriSV40 poly(A) signal3' LTR (Delta-U3)PuroRhPGK promotercPPT/CTSNm tracrRNANeoR/KanRU6 promoterProtein Tatgp41 peptideRREHIV-1 Psi5' LTR (truncated)RSV promoterT3 promoterM13 revlac operatorIS1CAP binding site

Plasmid Protocol

1. Centrifuge at 5,000×g for 5 min.

2. Carefully open the tube and add 20 μl of sterile water to dissolve the DNA.

3. Close the tube and incubate for 10 minutes at room temperature.

4. Briefly vortex the tube and then do a quick spin to concentrate the liquid at the bottom. Speed is less than 5000×g.

5. Store the plasmid at -20 ℃.

6. The concentration of plasmid re-measurement sometimes differs from the nominal value, which may be due to the position of the lyophilized plasmid in the tube, the efficiency of the re-dissolution, the measurement bias, and adsorption on the wall of the tube, therefore, it is recommended to transform and extract the plasmid before using it

General Plasmid Transform Protocol

1. Take one 100μl of the competent cells and thaw it on ice for 10min, add 2μl of plasmid, then ice bath for 30min, then heat-shock it at 42℃ for 60s, do not stir, and then ice bath for 2min.

2. Add 900μl of LB liquid medium without antibiotics, and incubate at 37℃ for 45min (30℃ for 1-1.5 hours) with 180rpm shaking.

3. Centrifuge at 6000rpm for 5min, leave only 100μl of supernatant to resuspend the bacterial precipitate and spread it onto the target plasmid-resistant LB plate.

4. Invert the plate and incubate at 37℃ for 14h, or at 30℃ for 20h.

5. Pick a single colony into LB liquid medium, add the corresponding antibiotics, incubate at 220rpm for 14h, and extract the plasmid according to the experimental needs and the instructions of the plasmid extraction kit.

Nme2sgRNA_pLKO vector Sequence

LOCUS       V017475                 9023 bp    DNA     circular SYN 01-JAN-1980
DEFINITION  Exported.
ACCESSION   V017475
VERSION     V017475
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
            .
REFERENCE   1  (bases 1 to 9023)
  AUTHORS   .
  TITLE     Direct Submission
FEATURES             Location/Qualifiers
     source          1..9023
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     rep_origin      complement(168..756)
                     /direction=LEFT
                     /label="ori"
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
                     replication"
     CDS             complement(930..1787)
                     /label="AmpR"
                     /note="beta-lactamase"
     promoter        complement(1788..1892)
                     /label="AmpR promoter"
     rep_origin      complement(1918..2373)
                     /direction=LEFT
                     /label="f1 ori"
                     /note="f1 bacteriophage origin of replication; arrow
                     indicates direction of (+) strand synthesis"
     primer_bind     2515..2531
                     /label="M13 fwd"
                     /note="common sequencing primer, one of multiple similar
                     variants"
     promoter        2541..2559
                     /label="T7 promoter"
                     /note="promoter for bacteriophage T7 RNA polymerase"
     rep_origin      complement(2580..2715)
                     /direction=LEFT
                     /label="SV40 ori"
                     /note="SV40 origin of replication"
     polyA_signal    complement(2742..2876)
                     /label="SV40 poly(A) signal"
                     /note="SV40 polyadenylation signal"
     LTR             complement(2948..3181)
                     /label="3' LTR (Delta-U3)"
                     /note="self-inactivating 3' long terminal repeat (LTR) from
                     HIV-1"
     CDS             complement(3312..3908)
                     /label="PuroR"
                     /note="puromycin N-acetyltransferase"
     promoter        complement(3930..4440)
                     /label="hPGK promoter"
                     /note="human phosphoglycerate kinase 1 promoter"
     misc_feature    complement(4489..4606)
                     /label="cPPT/CTS"
                     /note="central polypurine tract and central termination
                     sequence of HIV-1"
     misc_RNA        complement(4655..4747)
                     /label="Nm tracrRNA"
                     /note="trans-activating CRISPR RNA for the Neisseria
                     meningitidis CRISPR/Cas9 system (Hou et al., 2013)"
     CDS             4940..5731
                     /label="NeoR/KanR"
                     /note="aminoglycoside phosphotransferase"
     promoter        complement(5873..6113)
                     /label="U6 promoter"
                     /note="RNA polymerase III promoter for human U6 snRNA"
     CDS             complement(6221..6262)
                     /note="Protein Tat from Human immunodeficiency virus type 1
                     group M subtype B (isolate WMJ22). Accession#: P12509"
                     /label="Protein Tat"
     CDS             complement(6411..6455)
                     /label="gp41 peptide"
                     /note="antigenic peptide corresponding to amino acids 655
                     to 669 of the HIV envelope protein gp41 (Lutje Hulsik et
                     al., 2013)"
     misc_feature    complement(6640..6873)
                     /label="RRE"
                     /note="The Rev response element (RRE) of HIV-1 allows for
                     Rev-dependent mRNA export from the nucleus to the
                     cytoplasm."
     misc_feature    complement(7366..7491)
                     /label="HIV-1 Psi"
                     /note="packaging signal of human immunodeficiency virus
                     type 1"
     LTR             complement(7538..7718)
                     /label="5' LTR (truncated)"
                     /note="truncated 5' long terminal repeat (LTR) from HIV-1"
     promoter        complement(7719..7945)
                     /label="RSV promoter"
                     /note="Rous sarcoma virus enhancer/promoter"
     promoter        complement(7973..7991)
                     /label="T3 promoter"
                     /note="promoter for bacteriophage T3 RNA polymerase"
     primer_bind     complement(8012..8028)
                     /label="M13 rev"
                     /note="common sequencing primer, one of multiple similar
                     variants"
     protein_bind    complement(8036..8052)
                     /label="lac operator"
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be
                     relieved by adding lactose or
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     promoter        complement(8060..8090)
                     /label="lac promoter"
                     /note="promoter for the E. coli lac operon"
     mobile_element  8090..8857
                     /label="IS1"
                     /note="prokaryotic transposable element"
     protein_bind    complement(8882..8903)
                     /label="CAP binding site"
                     /note="CAP binding activates transcription in the presence
                     of cAMP."