pHAGE-TO-nmdCas9-3XmCherry vector (V017246)

Price Information

Cat No. Plasmid Name Availability Add to cart
V017246 pHAGE-TO-nmdCas9-3XmCherry In stock, 1 week for quality controls

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Two tubes of lyophilized plasmid will be delivered, each tube is about 5µg.

Basic Vector Information

Vector Name:
pHAGE-TO-nmdCas9-3XmCherry
Antibiotic Resistance:
Ampicillin
Length:
12104 bp
Type:
RNA interference
Replication origin:
ori
Host:
Mammalian cells, Lentivirus
Promoter:
CMV/TO
Growth Strain(s):
Stbl3
Growth Temperature:
37℃

pHAGE-TO-nmdCas9-3XmCherry vector Vector Map

pHAGE-TO-nmdCas9-3XmCherry12104 bp60012001800240030003600420048005400600066007200780084009000960010200108001140012000CMV promotertet operatorSV40 NLSNmdCas9SV40 NLSmCherryWPRE3' LTR (Delta-U3)AmpR promoterAmpRoriCAP binding sitelac promoterHIV-1 PsiRREgp41 peptideProtein TatcPPT/CTSCMV enhancer

Plasmid Protocol

1. Centrifuge at 5,000×g for 5 min.

2. Carefully open the tube and add 20 μl of sterile water to dissolve the DNA.

3. Close the tube and incubate for 10 minutes at room temperature.

4. Briefly vortex the tube and then do a quick spin to concentrate the liquid at the bottom. Speed is less than 5000×g.

5. Store the plasmid at -20 ℃.

6. The concentration of plasmid re-measurement sometimes differs from the nominal value, which may be due to the position of the lyophilized plasmid in the tube, the efficiency of the re-dissolution, the measurement bias, and adsorption on the wall of the tube, therefore, it is recommended to transform and extract the plasmid before using it

General Plasmid Transform Protocol

1. Take one 100μl of the competent cells and thaw it on ice for 10min, add 2μl of plasmid, then ice bath for 30min, then heat-shock it at 42℃ for 60s, do not stir, and then ice bath for 2min.

2. Add 900μl of LB liquid medium without antibiotics, and incubate at 37℃ for 45min (30℃ for 1-1.5 hours) with 180rpm shaking.

3. Centrifuge at 6000rpm for 5min, leave only 100μl of supernatant to resuspend the bacterial precipitate and spread it onto the target plasmid-resistant LB plate.

4. Invert the plate and incubate at 37℃ for 14h, or at 30℃ for 20h.

5. Pick a single colony into LB liquid medium, add the corresponding antibiotics, incubate at 220rpm for 14h, and extract the plasmid according to the experimental needs and the instructions of the plasmid extraction kit.

pHAGE-TO-nmdCas9-3XmCherry vector Sequence

Copy Sequence

Download GeneBank File(.gb)

LOCUS       V017246                12104 bp    DNA     circular SYN 01-JAN-1980
DEFINITION  Exported.
ACCESSION   V017246
VERSION     V017246
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
            .
REFERENCE   1  (bases 1 to 12104)
  AUTHORS   .
  TITLE     Direct Submission
FEATURES             Location/Qualifiers
     source          1..12104
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     promoter        1..204
                     /label="CMV promoter"
                     /note="human cytomegalovirus (CMV) immediate early
                     promoter"
     protein_bind    206..224
                     /label="tet operator"
                     /note="bacterial operator O2 for the tetR and tetA genes"
     CDS             384..404
                     /label="SV40 NLS"
                     /note="nuclear localization signal of SV40 (simian virus
                     40) large T antigen"
     CDS             417..3659
                     /label="NmdCas9"
                     /note="catalytically dead mutant of the Cas9 endonuclease
                     from the Neisseria meningitidis Type II CRISPR/Cas system"
     CDS             3678..3698
                     /label="SV40 NLS"
                     /note="nuclear localization signal of SV40 (simian virus
                     40) large T antigen"
     CDS             3711..4418
                     /label="mCherry"
                     /note="monomeric derivative of DsRed fluorescent protein
                     (Shaner et al., 2004)"
     misc_feature    5892..6480
                     /label="WPRE"
                     /note="woodchuck hepatitis virus posttranscriptional
                     regulatory element"
     LTR             6555..6788
                     /label="3' LTR (Delta-U3)"
                     /note="self-inactivating 3' long terminal repeat (LTR) from
                     HIV-1"
     promoter        6993..7097
                     /label="AmpR promoter"
     CDS             7098..7955
                     /label="AmpR"
                     /note="beta-lactamase"
     rep_origin      8129..8717
                     /label="ori"
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
                     replication"
     protein_bind    9128..9149
                     /label="CAP binding site"
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     promoter        9164..9194
                     /label="lac promoter"
                     /note="promoter for the E. coli lac operon"
     misc_feature    10183..10308
                     /label="HIV-1 Psi"
                     /note="packaging signal of human immunodeficiency virus
                     type 1"
     misc_feature    10805..11038
                     /label="RRE"
                     /note="The Rev response element (RRE) of HIV-1 allows for
                     Rev-dependent mRNA export from the nucleus to the
                     cytoplasm."
     CDS             11223..11267
                     /label="gp41 peptide"
                     /note="antigenic peptide corresponding to amino acids 655
                     to 669 of the HIV envelope protein gp41 (Lutje Hulsik et
                     al., 2013)"
     CDS             11416..11457
                     /note="Protein Tat from Human immunodeficiency virus type 1
                     group M subtype B (isolate WMJ22). Accession#: P12509"
                     /label="Protein Tat"
     misc_feature    11560..11677
                     /label="cPPT/CTS"
                     /note="central polypurine tract and central termination
                     sequence of HIV-1"
     enhancer        11801..12104
                     /label="CMV enhancer"
                     /note="human cytomegalovirus immediate early enhancer"