pDCpOE-N-N5L vector (V016144)

Basic Vector Information

Vector Name:
pDCpOE-N-N5L
Antibiotic Resistance:
Chloramphenicol
Length:
7691 bp
Type:
Cloning vector
Replication origin:
ori
Host:
Yeast
Source/Author:
Nemeth T.
Promoter:
TEF

pDCpOE-N-N5L vector Map

pDCpOE-N-N5L7691 bp3006009001200150018002100240027003000330036003900420045004800510054005700600063006600690072007500AmpR promoterAmpRoriCAP binding sitelac promoterlac operatorM13 revT3 promoterCandida albicans TDH3 promoterattR1lac UV5 promoterCmRccdBattR2Saccharomyces cerevisiae URA3 terminatorCandida parapsilosis NEUT5L sequence upstreamStuI site for plasmid linearizationCandida parapsilosis NEUT5L sequence downstreamTEF terminatorNrsRTEF promoterT7 promoterM13 fwdf1 ori

pDCpOE-N-N5L vector Sequence

LOCUS       62056_8340        7691 bp DNA     circular SYN 03-MAR-2020
DEFINITION  Cloning vector pDCpOE-N-N5L, complete sequence.
ACCESSION   MN974376
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 7691)
  AUTHORS   Nemeth T.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JAN-2020) Department of Microbiology, University of 
            Szeged, Kozep fasor 52, Szeged, Csongrad 6726, Hungary
REFERENCE   2  (bases 1 to 7691)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Submitted 
            (20-JAN-2020) Department of Microbiology, University of Szeged, 
            Kozep fasor 52, Szeged, Csongrad 6726, Hungary"
COMMENT     ##Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. v11
            Sequencing Technology :: IonTorrent
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..7691
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     promoter        24..128
                     /label=AmpR promoter
     CDS             129..986
                     /label=AmpR
                     /note="beta-lactamase"
     rep_origin      1160..1748
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     protein_bind    2036..2057
                     /label=CAP binding site
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     promoter        2072..2102
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    2110..2126
                     /label=lac operator
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     primer_bind     2134..2150
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     promoter        2171..2189
                     /label=T3 promoter
                     /note="promoter for bacteriophage T3 RNA polymerase"
     regulatory      2222..3071
                     /label=Candida albicans TDH3 promoter
                     /note="Candida albicans TDH3 promoter"
                     /regulatory_class="promoter"
     protein_bind    3078..3202
                     /label=attR1
                     /note="recombination site for the Gateway(R) LR reaction"
     promoter        3227..3257
                     /label=lac UV5 promoter
                     /note="E. coli lac promoter with an 'up' mutation"
     CDS             3311..3967
                     /label=CmR
                     /note="chloramphenicol acetyltransferase"
     CDS             4312..4614
                     /label=ccdB
                     /note="CcdB, a bacterial toxin that poisons DNA gyrase"
     protein_bind    complement(4658..4782)
                     /label=attR2
                     /note="recombination site for the Gateway(R) LR reaction"
     regulatory      4803..5043
                     /label=Saccharomyces cerevisiae URA3 terminator
                     /note="Saccharomyces cerevisiae URA3 terminator"
                     /regulatory_class="terminator"
     misc_feature    5064..5437
                     /label=Candida parapsilosis NEUT5L sequence upstream
                     /note="Candida parapsilosis NEUT5L sequence upstream"
     misc_feature    5438..5443
                     /label=StuI site for plasmid linearization
                     /note="StuI site for plasmid linearization"
     misc_feature    5444..5827
                     /label=Candida parapsilosis NEUT5L sequence downstream
                     /note="Candida parapsilosis NEUT5L sequence downstream"
     terminator      complement(5854..6051)
                     /label=TEF terminator
                     /note="Ashbya gossypii TEF terminator"
     CDS             complement(6069..6632)
                     /label=NrsR
                     /note="nourseothricin acetyltransferase"
     promoter        complement(6652..6995)
                     /label=TEF promoter
                     /note="Ashbya gossypii TEF promoter"
     promoter        complement(7052..7070)
                     /label=T7 promoter
                     /note="promoter for bacteriophage T7 RNA polymerase"
     primer_bind     complement(7077..7093)
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     rep_origin      complement(7234..7689)
                     /direction=LEFT
                     /label=f1 ori
                     /note="f1 bacteriophage origin of replication; arrow
                     indicates direction of (+) strand synthesis"

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