pEM001 vector (V015996)

Basic Vector Information

Vector Name:
pEM001
Antibiotic Resistance:
Kanamycin
Length:
5945 bp
Type:
Cloning vector
Replication origin:
ori
Source/Author:
Mancera E, Frazer C, Porman AM, Ruiz-Castro S
Promoter:
SP6

pEM001 vector Map

pEM0015945 bp60012001800240030003600420048005400CAP binding sitelac promoterlac operatorM13 revSP6 promotercontains promoter and 5' UTRATP phosphoribosyltransferasecontains 3' UTR and terminatorT7 promoterM13 fwdccdBNeoR/KanRBleoRori

pEM001 vector Sequence

LOCUS       V015996                 5945 bp    DNA     circular SYN 14-APR-2019
DEFINITION  Exported.
ACCESSION   V015996
VERSION     V015996
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
            .
REFERENCE   1  (bases 1 to 5945)
  AUTHORS   Mancera E, Frazer C, Porman AM, Ruiz-Castro S, Johnson AD, Bennett
            RJ.
  TITLE     Genetic Modification of Closely Related Candida Species
  JOURNAL   Front Microbiol 10, 357 (2019)
   PUBMED   30941104
REFERENCE   2  (bases 1 to 5945)
  AUTHORS   Mancera E, Frazer C, Porman AM, Ruiz S, Johnson AD, Bennett RJ.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2019) Departmento de Ingenieria Genetica, Centro
            de Investigacion y de Estudios Avanzados del Instituto Politecnico
            Nacional, Unidad Irapuato, Km. 9.6 Libramiento Norte Carrera
            Irapuato-Leon, Irapuato, Guanajuato 36824, Mexico
REFERENCE   3  (bases 1 to 5945)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Front
            Microbiol 10, 357 (2019)"
            SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
            (22-JAN-2019) Departmento de Ingenieria Genetica, Centro de
            Investigacion y de Estudios Avanzados del Instituto Politecnico
            Nacional, Unidad Irapuato, Km. 9.6 Libramiento Norte Carrera
            Irapuato-Leon, Irapuato, Guanajuato 36824, Mexico"
FEATURES             Location/Qualifiers
     source          1..5945
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     protein_bind    107..128
                     /label="CAP binding site"
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     promoter        143..173
                     /label="lac promoter"
                     /note="promoter for the E. coli lac operon"
     protein_bind    181..197
                     /label="lac operator"
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be
                     relieved by adding lactose or
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     primer_bind     205..221
                     /label="M13 rev"
                     /note="common sequencing primer, one of multiple similar
                     variants"
     promoter        239..257
                     /label="SP6 promoter"
                     /note="promoter for bacteriophage SP6 RNA polymerase"
     misc_feature    337..1332
                     /gene="HIS1"
                     /label="contains promoter and 5' UTR"
                     /note="contains promoter and 5' UTR"
     CDS             1333..2226
                     /gene="HIS1"
                     /label="ATP phosphoribosyltransferase"
                     /note="ATP phosphoribosyltransferase from Candida albicans
                     (strain SC5314 / ATCC MYA-2876). Accession#: P46586"
     misc_feature    2230..2762
                     /gene="HIS1"
                     /label="contains 3' UTR and terminator"
                     /note="contains 3' UTR and terminator"
     promoter        complement(2833..2851)
                     /label="T7 promoter"
                     /note="promoter for bacteriophage T7 RNA polymerase"
     primer_bind     complement(2858..2874)
                     /label="M13 fwd"
                     /note="common sequencing primer, one of multiple similar
                     variants"
     CDS             3012..3311
                     /label="ccdB"
                     /note="CcdB, a bacterial toxin that poisons DNA gyrase"
     CDS             3663..4454
                     /label="NeoR/KanR"
                     /note="aminoglycoside phosphotransferase"
     CDS             4664..5035
                     /label="BleoR"
                     /note="antibiotic-binding protein"
     rep_origin      5176..5764
                     /direction=RIGHT
                     /label="ori"
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
                     replication"

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