Octt(core)_Reporter vector (V015961)

Basic Vector Information

Vector Name:
Octt(core)_Reporter
Antibiotic Resistance:
Kanamycin
Length:
4235 bp
Type:
Cloning vector
Replication origin:
pSC101 ori
Source/Author:
Groseclose TM, Rondon RE, Herde ZD, Aldrete CA

Octt(core)_Reporter vector Map

Octt(core)_Reporter4235 bp600120018002400300036004200trc promoterstrong bacterial RBSsuperfolder GFPrrnB T1 terminatorRep101pSC101 orilambda t0 terminatorNeoR/KanR

Octt(core)_Reporter vector Sequence

LOCUS       62056_1795        4235 bp DNA     circular SYN 10-SEP-2020
DEFINITION  Cloning vector Octt(core)_Reporter, complete sequence.
ACCESSION   MT127265
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 4235)
  AUTHORS   Groseclose TM, Rondon RE, Herde ZD, Aldrete CA, Wilson CJ.
  TITLE     Engineered systems of inducible anti-repressors for the next 
            generation of biological programming
  JOURNAL   Nat Commun 11 (1), 4440 (2020)
  PUBMED    32895374
REFERENCE   2  (bases 1 to 4235)
  AUTHORS   Groseclose TM, Rondon RE, Herde ZD, Aldrete CA, Wilson CJ.
  TITLE     Direct Submission
  JOURNAL   
REFERENCE   3  (bases 1 to 4235)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Nat 
            Commun"; date: "2020"; volume: "11"; issue: "1"; pages: "4440"
COMMENT     SGRef: number: 2; type: "Journal Article"; journalName: "Submitted 
            (28-FEB-2020) Chemical "
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing 
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..4235
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     regulatory      51..79
                     /label=trc promoter
                     /note="trc promoter"
                     /regulatory_class="promoter"
     regulatory      51..56
                     /label=trc promoter -35 hexamer
                     /note="trc promoter -35 hexamer"
                     /regulatory_class="promoter"
     regulatory      57..73
                     /label=operator Octt
                     /note="operator Octt"
                     /regulatory_class="other"
     regulatory      74..79
                     /label=trc promoter -10 hexamer
                     /note="trc promoter -10 hexamer"
                     /regulatory_class="promoter"
     regulatory      98..109
                     /label=strong bacterial RBS
                     /note="strong bacterial RBS"
                     /regulatory_class="ribosome_binding_site"
     CDS             116..829
                     /label=superfolder GFP
                     /note="GFP variant that folds robustly even when fused to
                     poorly folded proteins (Nager et al., 2011)"
     terminator      844..930
                     /label=rrnB T1 terminator
                     /note="transcription terminator T1 from the E. coli rrnB
                     gene"
     CDS             complement(1471..2418)
                     /label=Rep101
                     /note="RepA protein needed for replication with the pSC101 
                     origin"
     rep_origin      complement(2466..2688)
                     /direction=LEFT
                     /label=pSC101 ori
                     /note="low-copy replication origin that requires the Rep101
                     protein"
     terminator      complement(3180..3274)
                     /label=lambda t0 terminator
                     /note="transcription terminator from phage lambda"
     CDS             complement(3308..4099)
                     /label=NeoR/KanR
                     /note="aminoglycoside phosphotransferase"

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