pJC04 vector (V015746)

Basic Vector Information

Vector Name:
pJC04
Length:
5486 bp
Type:
Cloning vector
Replication origin:
pSC101 ori
Source/Author:
Cui J.

pJC04 vector Map

pJC045486 bp60012001800240030003600420048005400Rep101pSC101 oriupstream homology recombination flankferredoxindownstream homology recombination flankkanamycin promoterhtkThymidine kinasegene target internal homology recombination flank

pJC04 vector Sequence

LOCUS       V015746                 5486 bp    DNA     circular SYN 10-MAR-2019
DEFINITION  Exported.
ACCESSION   V015746
VERSION     V015746
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
            .
REFERENCE   1  (bases 1 to 5486)
  AUTHORS   Cui J.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JUN-2018) MCB, Dartmouth College, 14 Engineering
            Drive, Hanover, NH 03755, USA
REFERENCE   2  (bases 1 to 5486)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
            SGRef: number: 1; type: "Journal Article"; journalName: "Submitted
            (28-JUN-2018) MCB, Dartmouth College, 14 Engineering Drive, Hanover,
            NH 03755, USA"
FEATURES             Location/Qualifiers
     source          1..5486
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     CDS             complement(100..1047)
                     /label="Rep101"
                     /note="RepA protein needed for replication with the pSC101
                     origin"
     rep_origin      complement(1095..1317)
                     /direction=LEFT
                     /label="pSC101 ori"
                     /note="low-copy replication origin that requires the Rep101
                     protein"
     misc_feature    1844..2328
                     /label="upstream homology recombination flank"
                     /note="upstream homology recombination flank"
     CDS             2329..2499
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /label="ferredoxin"
                     /note="Clo1313_2761"
                     /protein_id="QBI89800.1"
                     /translation="MAYFITDACISCGACESECPVSCISPGDSVYVIDADACIECGACA
                     NVCPVDAPQQK"
     misc_feature    2500..3040
                     /label="downstream homology recombination flank"
                     /note="downstream homology recombination flank"
     regulatory      3045..3575
                     /label="kanamycin promoter"
                     /note="kanamycin promoter"
                     /regulatory_class="promoter"
     gene            3576..4337
                     /gene="htk"
                     /label="htk"
     CDS             3576..4337
                     /codon_start=1
                     /transl_table=11
                     /gene="htk"
                     /product="highly thermostable kanamycin
                     nucleotidyltransferase"
                     /EC_number="2.7.7.46"
                     /label="htk"
                     /protein_id="QBI89801.1"
                     /translation="MKGPIIMTREERMKIVHEIKERILDKYGDDVKAIGVYGSLGRQTD
                     GPYSDIEMMCVLSTEGVEFSYEWTTGEWKAEVNFYSEEILLDYASRVEPDWPLTHGRFF
                     SILPIYDPGGYFEKVYQTAKSVEAQKFHDAICALIVEELFEYAGKWRNIRVQGPTTFLP
                     SLTVQVAMAGAMLIGLHHRICYTTSASVLTEAVKQPDLPPGYVQLCQLVMSGQLSDPEK
                     LLESLENFWNGVQEWAERHGYIVDVSKRIPF"
     CDS             4361..4939
                     /gene="tdk"
                     /label="Thymidine kinase"
                     /note="Thymidine kinase from Thermoanaerobacter
                     pseudethanolicus (strain ATCC 33223 / 39E). Accession#:
                     B0K7G9"
     misc_feature    5034..5486
                     /label="gene target internal homology recombination flank"
                     /note="gene target internal homology recombination flank"

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