Basic Vector Information
- Vector Name:
- pJF1153
- Antibiotic Resistance:
- Streptomycin
- Length:
- 6550 bp
- Type:
- Transformation vector
- Replication origin:
- ori
- Source/Author:
- Ruf S, Forner J, Hasse C, Kroop X
pJF1153 vector Map
pJF1153 vector Sequence
LOCUS V015653 6550 bp DNA circular SYN 01-FEB-2022 DEFINITION Exported. ACCESSION V015653 VERSION V015653 KEYWORDS . SOURCE synthetic DNA construct ORGANISM synthetic DNA construct . REFERENCE 1 (bases 1 to 6550) AUTHORS Ruf S, Forner J, Hasse C, Kroop X, Seeger S, Schollbach L, Schadach A, Bock R. TITLE High-efficiency generation of fertile transplastomic Arabidopsis plants JOURNAL Nat Plants 5 (3), 282-289 (2019) PUBMED 30778165 REFERENCE 2 (bases 1 to 6550) AUTHORS Forner J, Hasse C, Ruf S, Bock R. TITLE Direct Submission JOURNAL Submitted (06-JUL-2018) Organelle Biology, Biotechnology and Molecular Ecophysiology, Max Planck Institute of Molecular Plant Physiology, Am Muehlenberg 1, Potsdam, Brandenburg D-14476, Germany REFERENCE 3 (bases 1 to 6550) AUTHORS . TITLE Direct Submission COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## SGRef: number: 1; type: "Journal Article"; journalName: "Nat Plants"; date: "2019"; volume: "5"; issue: "3"; pages: "282-289" SGRef: number: 2; type: "Journal Article"; journalName: "Submitted (06-JUL-2018) Organelle Biology, Biotechnology and Molecular Ecophysiology, Max Planck Institute of Molecular Plant Physiology, Am Muehlenberg 1, Potsdam, Brandenburg D-14476, Germany" FEATURES Location/Qualifiers source 1..6550 /mol_type="other DNA" /organism="synthetic DNA construct" gene 1..521 /gene="psaB" /label="psaB" CDS 1..521 /codon_start=3 /transl_table=11 /gene="psaB" /product="PSAB" /label="psaB" /protein_id="QBG49749.1" /translation="GRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHITLWQGNVS QFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLIS WRGYWQELIETLAWAHERTPLANLIRWKDKPVALSIVQARLVGLAHFSVGYIFTYAAFL IASTSGKFG" CDS 656..955 /gene="rps14" /label="Small ribosomal subunit protein uS14c" /note="Small ribosomal subunit protein uS14c from Arabidopsis thaliana. Accession#: P56804" tRNA 1119..1192 /product="tRNA-Met" /label="trnfM" /note="trnfM" regulatory 1302..1451 /label="Zea mays clpP promoter" /note="Zea mays clpP promoter" /regulatory_class="promoter" CDS 1453..2241 /label="SmR" /note="aminoglycoside adenylyltransferase (Murphy, 1985)" terminator 2252..2338 /label="rrnB T1 terminator" /note="transcription terminator T1 from the E. coli rrnB gene" terminator 2430..2457 /label="rrnB T2 terminator" /note="transcription terminator T2 from the E. coli rrnB gene" primer_bind complement(2477..2493) /label="KS primer" /note="common sequencing primer, one of multiple similar variants" tRNA complement(2553..2623) /product="tRNA-Gly" CDS complement(3177..3362) /gene="psbZ" /label="Photosystem II reaction center protein Z" /note="Photosystem II reaction center protein Z from Nicotiana tabacum. Accession#: P09974" promoter complement(3701..3719) /label="T7 promoter" /note="promoter for bacteriophage T7 RNA polymerase" primer_bind complement(3729..3745) /label="M13 fwd" /note="common sequencing primer, one of multiple similar variants" rep_origin 3887..4342 /label="f1 ori" /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" promoter 4368..4472 /label="AmpR promoter" CDS 4473..5330 /label="AmpR" /note="beta-lactamase" rep_origin 5504..6092 /label="ori" /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" protein_bind 6380..6401 /label="CAP binding site" /note="CAP binding activates transcription in the presence of cAMP." promoter 6416..6446 /label="lac promoter" /note="promoter for the E. coli lac operon" protein_bind 6454..6470 /label="lac operator" /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." primer_bind 6478..6494 /label="M13 rev" /note="common sequencing primer, one of multiple similar variants" promoter 6515..6533 /label="T3 promoter" /note="promoter for bacteriophage T3 RNA polymerase"
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