Basic Vector Information
- Vector Name:
- pcDNA3-WSN-PB2
- Antibiotic Resistance:
- Ampicillin
- Length:
- 7889 bp
- Type:
- Cloning vector
- Replication origin:
- ori
- Source/Author:
- Declercq M, Biquand E, Karim M, Pietrosemoli N
- Promoter:
- SP6
pcDNA3-WSN-PB2 vector Map
pcDNA3-WSN-PB2 vector Sequence
LOCUS V015356 7889 bp DNA circular SYN 28-OCT-2020
DEFINITION Exported.
ACCESSION V015356
VERSION V015356
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 7889)
AUTHORS Declercq M, Biquand E, Karim M, Pietrosemoli N, Jacob Y, Demeret C,
Barbezange C, van der Werf S.
TITLE Influenza A virus co-opts ERI1 exonuclease bound to histone mRNA to
promote viral transcription
JOURNAL Nucleic Acids Res 48 (18), 10428-10440 (2020)
PUBMED 32960265
REFERENCE 2 (bases 1 to 7889)
AUTHORS Declercq M, Biquand E, Demeret C, Karim M, Pietrosemoli N, Jacob Y,
Demeret C, Van der Werf S, Barbezange C.
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2020) National Influenza Centre, Sciensano, Rue
Juliette Wytsman 14, Brussels 1180, Belgium
REFERENCE 3 (bases 1 to 7889)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
SGRef: number: 1; type: "Journal Article"; journalName: "Nucleic
Acids Res"; date: "2020"; volume: "48"; issue: "18"; pages:
"10428-10440"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(03-SEP-2020) National Influenza Centre, Sciensano, Rue Juliette
Wytsman 14, Brussels 1180, Belgium"
FEATURES Location/Qualifiers
source 1..7889
/mol_type="other DNA"
/organism="synthetic DNA construct"
enhancer 235..614
/label="CMV enhancer"
/note="human cytomegalovirus immediate early enhancer"
promoter 615..818
/label="CMV promoter"
/note="human cytomegalovirus (CMV) immediate early
promoter"
promoter 863..881
/label="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
CDS 929..3205
/gene="PB2"
/label="Polymerase basic protein 2"
/note="Polymerase basic protein 2 from Influenza A virus
(strain A/Wilson-Smith/1933 H1N1). Accession#: P03427"
promoter complement(3441..3459)
/label="SP6 promoter"
/note="promoter for bacteriophage SP6 RNA polymerase"
polyA_signal 3485..3709
/label="bGH poly(A) signal"
/note="bovine growth hormone polyadenylation signal"
rep_origin 3755..4183
/label="f1 ori"
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 4197..4527
/label="SV40 promoter"
/note="SV40 enhancer and early promoter"
CDS 4594..5385
/label="NeoR/KanR"
/note="aminoglycoside phosphotransferase"
polyA_signal 5562..5695
/label="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"
primer_bind complement(5732..5748)
/label="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
protein_bind complement(5756..5772)
/label="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(5780..5810)
/label="lac promoter"
/note="promoter for the E. coli lac operon"
protein_bind complement(5825..5846)
/label="CAP binding site"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(6134..6722)
/direction=LEFT
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(6896..7753)
/label="AmpR"
/note="beta-lactamase"
promoter complement(7754..7858)
/label="AmpR promoter"
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