pLX-TuRV vector (V015264)

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LOCUS       62056_16350        8306 bp DNA     circular SYN 17-FEB-2021
DEFINITION  Cloning vector pLX-TuRV, complete sequence.
ACCESSION   MW281335
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 8306)
  AUTHORS   Pasin F.
  TITLE     Oligonucleotide abundance biases aid design of a type IIS synthetic 
            genomics framework with plant virome capacity
  JOURNAL   Biotechnol J, e2000354 (2021) In press
  PUBMED    33410597
REFERENCE   2  (bases 1 to 8306)
  AUTHORS   Pasin F.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2020) Agricultural Biotechnology Research Center, 
            Academia Sinica, n.a., Taipei, Taipei 11529, Taiwan
REFERENCE   3  (bases 1 to 8306)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Biotechnol 
            J, e2000354 (2021) In press"
COMMENT     SGRef: number: 2; type: "Journal Article"; journalName: "Submitted 
            (19-NOV-2020) Agricultural Biotechnology Research Center, Academia 
            Sinica, n.a., Taipei, Taipei 11529, Taiwan"
FEATURES             Location/Qualifiers
     source          1..8306
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     regulatory      25..72
                     /label=bacterial terminator
                     /note="bacterial terminator"
                     /regulatory_class="terminator"
     misc_feature    133..157
                     /label=LB T-DNA repeat
                     /note="left border repeat from octopine Ach5 T-DNA"
     misc_feature    184..208
                     /label=LB T-DNA repeat
                     /note="left border repeat from nopaline C58 T-DNA"
     promoter        535..1203
                     /label=CaMV 35S promoter (enhanced)
                     /note="cauliflower mosaic virus 35S promoter with a
                     duplicated enhancer region"
     misc_feature    1200..2777
                     /note="Synthetic fragment; BB.TuRV_1"
     misc_feature    1204..5289
                     /note="derived from turnip rosette virus INSD accession 
                     KC778720.1"
     misc_feature    2774..4157
                     /note="Synthetic fragment; BB.TuRV_2"
     misc_feature    2774..2777
                     /label=TTGT (AarI)
                     /note="TTGT (AarI)"
     misc_feature    4154..5347
                     /note="Synthetic fragment; BB.TuRV_3"
     misc_feature    4154..4157
                     /label=ACAC (AarI)
                     /note="ACAC (AarI)"
     misc_feature    5289..5334
                     /label=ribozyme
                     /note="ribozyme"
     misc_feature    5344..5347
                     /label=CCCA (AarI)
                     /note="CCCA (AarI)"
     terminator      5355..5607
                     /label=NOS terminator
                     /note="nopaline synthase terminator and poly(A) signal"
     misc_feature    5672..5695
                     /label=RB_pTiA6
                     /note="RB_pTiA6"
     misc_feature    5705..5733
                     /label=RB_overdrive_pTiA6
                     /note="RB_overdrive_pTiA6"
     regulatory      complement(5760..5800)
                     /label=bacterial terminator
                     /note="bacterial terminator"
                     /regulatory_class="terminator"
     CDS             complement(5847..6659)
                     /label=KanR
                     /note="aminoglycoside phosphotransferase"
     CDS             complement(6788..7447)
                     /label=pBBR1 Rep
                     /note="replication protein for the broad-host-range plasmid
                     pBBR1 from Bordetella bronchiseptica"
     rep_origin      complement(7448..8219)
                     /direction=LEFT
                     /label=pBBR1 oriV
                     /note="replication origin of the broad-host-range plasmid
                     pBBR1 from Bordetella bronchiseptica; requires the pBBR1 
                     Rep protein for replication"