pkM225 vector (V005209)

Basic Vector Information

Vector Name:
pkM225
Antibiotic Resistance:
Kanamycin
Length:
6039 bp
Type:
Transposon vector
Replication origin:
ori
Source/Author:
Mertens K, Berg JP, Brennan RE, Weber MM, Chen C, Samuel JE.

pkM225 vector Map

pkM2256039 bp30060090012001500180021002400270030003300360039004200450048005100540057006000transposase TnA7KanRM13 fwdIR; inverted repeatorimCherryCmRIR; inverted repeat

pkM225 vector Sequence

LOCUS       40924_26889        6039 bp DNA     circular SYN 18-DEC-2018
DEFINITION  Transposon vector pkM225, complete sequence.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 6039)
  AUTHORS   Mertens K, Berg JP, Brennan RE, Weber MM, Chen C, Samuel JE.
  TITLE     Evolutionary Loss of katE as Balance Mechanism for Antioxidant Gene 
            Expression in Coxiella burnetii
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6039)
  AUTHORS   Mertens K, Berg JP, Brennan RE, Weber MM, Chen C, Samuel JE.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2010) Microbial and Molecular Pathogenesis, Texas 
            A
REFERENCE   3  (bases 1 to 6039)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 6039)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: 
            "Unpublished"
COMMENT     SGRef: number: 2; type: "Journal Article"; journalName: "Submitted 
            (09-OCT-2010) Microbial and Molecular Pathogenesis, Texas A"
COMMENT     SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..6039
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     CDS             329..1375
                     /codon_start=1
                     /product="transposase TnA7"
                     /label=transposase TnA7
                     /protein_id="ADQ57456.1"
                     /translation="MEKKEFRVLIKYCFLKGKNTVEAKTWLDNEFPDSAPGKSTIIDWY
                     AKFKRGEMSTEDGERSGRPKEVVTDENIKKIHKMILNDRKMKLIEIAEALKISKERVGH
                     IIHQYLDMRKLCAKWVPRELTFDQKQQRVDDSERCLQLLTRNTPEFFRRYVTMDETWLH
                     HYTPESNRQSAEWTATGEPSPKRGKTQKSAGKVMASVFWDAHGIIFIDYLEKGKTINSD
                     YYMALLERLKVEIAAKRPHMKKKKVLFHQDNAPCHKSLRTMAKIRELGFELLPHPPYSP
                     DLAPSDFFLFSDLKRMLAGKKFGCNEEVIAETEAYFEAKPKEYYRNGIKKLEGRYNRCI
                     ALEGNYVE"
     CDS             1749..2555
                     /label=KanR
                     /note="aminoglycoside phosphotransferase"
     primer_bind     complement(2630..2646)
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     repeat_region   2796..2822
                     /note="IR; inverted repeat"
     rep_origin      complement(2923..3511)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     CDS             4313..5020
                     /label=mCherry
                     /note="monomeric derivative of DsRed fluorescent protein
                     (Shaner et al., 2004)"
     CDS             5310..5966
                     /label=CmR
                     /note="chloramphenicol acetyltransferase"
     repeat_region   6011..6037
                     /note="IR; inverted repeat"

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