pKanB alpha vector (V005256)

Basic Vector Information

Vector Name:
pKanB alpha
Antibiotic Resistance:
Kanamycin
Length:
4558 bp
Type:
Extracellular expression vector
Replication origin:
ori
Source/Author:
Lin-Cereghino J, Hashimoto MD, Moy A, Castelo J, Orazem CC, Kuo P, Xiong S, Gandhi V, Hatae CT, Chan A, Lin-Cereghino GP.
Promoter:
AOX1

pKanB alpha vector Map

pKanB alpha4558 bp600120018002400300036004200AOX1 promoteralpha-factor secretion signalMyc6xHisAOX1 terminatorKanRMyc6xHisAOX1 terminatorCYC1 terminatorori

pKanB alpha vector Sequence

LOCUS       40924_26531        4558 bp DNA     circular SYN 18-DEC-2018
DEFINITION  Extracellular expression vector pKanB alpha, complete sequence.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 4558)
  AUTHORS   Lin-Cereghino J, Hashimoto MD, Moy A, Castelo J, Orazem CC, Kuo P, 
            Xiong S, Gandhi V, Hatae CT, Chan A, Lin-Cereghino GP.
  TITLE     Direct selection of Pichia pastoris expression strains using new 
            G418 resistance vectors
  JOURNAL   Yeast 25 (4), 293-299 (2008)
  PUBMED    18327886
REFERENCE   2  (bases 1 to 4558)
  AUTHORS   Lin-Cereghino G, Lin-Cereghino J.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-NOV-2007) Biological Sciences, University of the 
            Pacific, 3601 Pacific Ave, Stockton, CA 95211, USA
REFERENCE   3  (bases 1 to 4558)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 4558)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Yeast"; 
            date: "2008"; volume: "25"; issue: "4"; pages: "293-299"
COMMENT     SGRef: number: 2; type: "Journal Article"; journalName: "Submitted 
            (17-NOV-2007) Biological Sciences, University of the Pacific, 3601 
            Pacific Ave, Stockton, CA 95211, USA"
COMMENT     SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..4558
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     promoter        2..940
                     /label=AOX1 promoter
                     /note="inducible promoter, regulated by methanol"
     CDS             941..1207
                     /codon_start=1
                     /label=alpha-factor secretion signal
                     /note="N-terminal secretion signal from S. cerevisiae 
                     alpha-factor"
                     /translation="MRFPSIFTAVLFAASSALAAPVNTTTEDETAQIPAEAVIGYSDLE
                     GDFDVAVLPFSNSTNNGLLFINTTIASIAAKEEGVSLEKREAEA"
     CDS             1279..1308
                     /codon_start=1
                     /label=Myc
                     /note="Myc (human c-Myc proto-oncogene) epitope tag"
                     /translation="EQKLISEEDL"
     CDS             1324..1341
                     /codon_start=1
                     /label=6xHis
                     /note="6xHis affinity tag"
                     /translation="HHHHHH"
     terminator      1421..1667
                     /label=AOX1 terminator
                     /note="transcription terminator for AOX1"
     CDS             2226..3038
                     /codon_start=1
                     /label=KanR
                     /note="aminoglycoside phosphotransferase"
                     /translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG
                     KPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK
                     TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA
                     SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI
                     ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
     CDS             3060..3089
                     /codon_start=1
                     /label=Myc
                     /note="Myc (human c-Myc proto-oncogene) epitope tag"
                     /translation="EQKLISEEDL"
     CDS             3105..3122
                     /codon_start=1
                     /label=6xHis
                     /note="6xHis affinity tag"
                     /translation="HHHHHH"
     terminator      3201..3447
                     /gene="Pichia pastoris AOX1"
                     /label=AOX1 terminator
                     /note="transcription terminator for AOX1"
     terminator      3568..3815
                     /label=CYC1 terminator
                     /note="transcription terminator for CYC1"
     rep_origin      complement(3890..4478)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"

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