pLX-B2-NptII-DsRED vector (V004899)

Basic Vector Information

Vector Name:
pLX-B2-NptII-DsRED
Antibiotic Resistance:
Kanamycin
Length:
6637 bp
Type:
Cloning vector
Replication origin:
pBBR1 oriV
Host:
Plants
Source/Author:
Pasin F, Bedoya LC, Bernabe-Orts JM, Gallo A, Simon-Mateo C, Orzaez D, Garcia JA.
Promoter:
CaMV 35S

pLX-B2-NptII-DsRED vector Vector Map

pLX-B2-NptII-DsRED6637 bp3006009001200150018002100240027003000330036003900420045004800510054005700600063006600assembly linkerLB T-DNA repeatLB T-DNA repeatNOS terminatorNeoR/KanRNOS promoterCaMV 35S promoterDsRed2CaMV 35SRBassembly linkerKanRassembly linkerpBBR1 ReppBBR1 oriV

pLX-B2-NptII-DsRED vector Sequence

Copy Sequence

Download GeneBank File(.gb)

LOCUS       40924_29316        6637 bp DNA     circular SYN 18-DEC-2018
DEFINITION  Cloning vector pLX-B2-NptII-DsRED, complete sequence.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 6637)
  AUTHORS   Pasin F, Bedoya LC, Bernabe-Orts JM, Gallo A, Simon-Mateo C, Orzaez 
            D, Garcia JA.
  TITLE     Multiple T-DNA Delivery to Plants Using Novel Mini Binary Vectors 
            with Compatible Replication Origins
  JOURNAL   ACS Synth Biol (2017) In press
  PUBMED    28657330
REFERENCE   2  (bases 1 to 6637)
  AUTHORS   Pasin F, Garcia JA.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-MAR-2017) Department of Plant Molecular Genetics, 
            Centro Nacional de Biotecnologia (CNB-CSIC), Darwin 3, Madrid, 
            Madrid 28049, Spain
REFERENCE   3  (bases 1 to 6637)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 6637)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "ACS Synth 
            Biol (2017) In press"
COMMENT     SGRef: number: 2; type: "Journal Article"; journalName: "Submitted 
            (26-MAR-2017) Department of Plant Molecular Genetics, Centro 
            Nacional de Biotecnologia (CNB-CSIC), Darwin 3, Madrid, Madrid 
            28049, Spain"
COMMENT     SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..6637
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     misc_feature    1..24
                     /label=assembly linker
                     /note="assembly linker"
     regulatory      25..72
                     /regulatory_class="terminator"
     misc_feature    133..157
                     /label=LB T-DNA repeat
                     /note="left border repeat from octopine Ach5 T-DNA"
     misc_feature    184..208
                     /label=LB T-DNA repeat
                     /note="left border repeat from nopaline C58 T-DNA"
     terminator      complement(287..539)
                     /label=NOS terminator
                     /note="nopaline synthase terminator and poly(A) signal"
     CDS             complement(582..1373)
                     /label=NeoR/KanR
                     /note="aminoglycoside phosphotransferase"
     promoter        complement(1407..1586)
                     /label=NOS promoter
                     /note="nopaline synthase promoter"
     promoter        2450..2794
                     /label=CaMV 35S promoter
                     /note="strong constitutive promoter from cauliflower mosaic
                     virus"
     CDS             2867..3541
                     /label=DsRed2
                     /note="improved tetrameric variant of DsRed fluorescent
                     protein"
     regulatory      complement(3549..3774)
                     /label=CaMV 35S
                     /note="CaMV 35S"
                     /regulatory_class="terminator"
     misc_feature    4003..4026
                     /label=RB
                     /note="RB"
     regulatory      complement(4091..4131)
                     /regulatory_class="terminator"
     misc_feature    4141..4164
                     /label=assembly linker
                     /note="assembly linker"
     CDS             complement(4178..4990)
                     /label=KanR
                     /note="aminoglycoside phosphotransferase"
     misc_feature    5092..5115
                     /label=assembly linker
                     /note="assembly linker"
     CDS             complement(5119..5778)
                     /label=pBBR1 Rep
                     /note="replication protein for the broad-host-range plasmid
                     pBBR1 from Bordetella bronchiseptica"
     rep_origin      complement(5779..6550)
                     /direction=LEFT
                     /label=pBBR1 oriV
                     /note="replication origin of the broad-host-range plasmid
                     pBBR1 from Bordetella bronchiseptica; requires the pBBR1 
                     Rep protein for replication"

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