pRHA-67 vector (V012419)

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Two tubes of lyophilized plasmid will be delivered, each tube is about 5µg.

Basic Vector Information

Vector Name:
pRHA-67
Antibiotic Resistance:
Ampicillin
Length:
4745 bp
Type:
Cloning Vectors
Replication origin:
ori
Source/Author:
Giacalone MJ, Gentile AM, Lovitt BT, Berkley NL, Gunderson CW,
Copy Number:
High copy number
Promoter:
rhaB
3' Primer:
M13 rev

pRHA-67 vector Map

pRHA-674745 bp600120018002400300036004200M13 fwdrhaRrhaSrhaB promoterRBSMCSM13 revlac operatorlac promoterCAP binding siteoriAmpRAmpR promoter

Plasmid Protocol

1. Centrifuge at 5,000×g for 5 min.

2. Carefully open the tube and add 20 μl of sterile water to dissolve the DNA.

3. Close the tube and incubate for 10 minutes at room temperature.

4. Briefly vortex the tube and then do a quick spin to concentrate the liquid at the bottom. Speed is less than 5000×g.

5. Store the plasmid at -20 ℃.

6. The concentration of plasmid re-measurement sometimes differs from the nominal value, which may be due to the position of the lyophilized plasmid in the tube, the efficiency of the re-dissolution, the measurement bias, and adsorption on the wall of the tube, therefore, it is recommended to transform and extract the plasmid before using it

General Plasmid Transform Protocol

1. Take one 100μl of the competent cells and thaw it on ice for 10min, add 2μl of plasmid, then ice bath for 30min, then heat-shock it at 42℃ for 60s, do not stir, and then ice bath for 2min.

2. Add 900μl of LB liquid medium without antibiotics, and incubate at 37℃ for 45min (30℃ for 1-1.5 hours) with 180rpm shaking.

3. Centrifuge at 6000rpm for 5min, leave only 100μl of supernatant to resuspend the bacterial precipitate and spread it onto the target plasmid-resistant LB plate.

4. Invert the plate and incubate at 37℃ for 14h, or at 30℃ for 20h.

5. Pick a single colony into LB liquid medium, add the corresponding antibiotics, incubate at 220rpm for 14h, and extract the plasmid according to the experimental needs and the instructions of the plasmid extraction kit.

pRHA-67 vector Sequence

LOCUS       pRHA-67.        4745 bp DNA     circular SYN 01-JAN-1980
DEFINITION  pUC18-derived plasmid encoding the rhaB promoter plus rhaR and rhaS 
            genes, for rhamnose-inducible protein expression in E. coli.
ACCESSION   .
VERSION     .
KEYWORDS    pRHA-67
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 4745)
  AUTHORS   Giacalone MJ, Gentile AM, Lovitt BT, Berkley NL, Gunderson CW, 
            Surber MW.
  TITLE     Toxic protein expression in Escherichia coli using a rhamnose-based 
            tightly regulated and tunable promoter system.
  JOURNAL   BioTechniques 2006;40:355-64.
  PUBMED    16568824
REFERENCE   2  (bases 1 to 4745)
  AUTHORS   Xbrane Bioscience
  TITLE     Direct Submission
REFERENCE   3  (bases 1 to 4745)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: 
            "BioTechniques"; date: "2006"; volume: "40"; pages: "355-64"
COMMENT     SGRef: number: 2; type: "Journal Article"
COMMENT     This plasmid sequence was reconstructed from the procedure described
            in the original paper. The plasmid size is slightly different than 
            reported.
FEATURES             Location/Qualifiers
     source          1..4745
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     primer_bind     379..395
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     gene            405..410
                     /gene="rhaT"
                     /gene_synonym="ECK3900; JW3878"
                     /locus_tag="b3907"
                     /label=rhaT
                     /note="rhaT"
                     /db_xref="EcoGene:EG11313"
                     /db_xref="GeneID:948398"
     CDS             complement(410..1255)
                     /label=rhaR
                     /note="transcriptional activator of rhaR and rhaS"
     CDS             complement(1332..2165)
                     /label=rhaS
                     /note="positive regulator of the rhaB promoter"
     promoter        2311..2429
                     /label=rhaB promoter
                     /note="promoter of the E. coli rhaBAD operon, conferring
                     tight induction with L-rhamnose and repression with 
                     D-glucose in the presence of RhaR and RhaS (Giacalone et 
                     al., 2006)"
     misc_feature    2439..2444
                     /label=RBS
                     /note="RBS"
                     /note="ribosome binding site"
     misc_feature    2447..2508
                     /label=MCS
                     /note="MCS"
                     /note="pUC19 multiple cloning site"
     primer_bind     complement(2524..2540)
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     protein_bind    complement(2548..2564)
                     /label=lac operator
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     promoter        complement(2572..2602)
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    complement(2617..2638)
                     /label=CAP binding site
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     rep_origin      complement(2926..3514)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     CDS             complement(3688..4545)
                     /label=AmpR
                     /note="beta-lactamase"
     promoter        complement(4546..4650)
                     /label=AmpR promoter