pAc-sgRNA-Cas9 vector (V012308)

Price Information

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V012308 pAc-sgRNA-Cas9 In stock, instant shipping

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Two tubes of lyophilized plasmid will be delivered, each tube is about 5µg.

Basic Vector Information

Vector Name:
pAc-sgRNA-Cas9
Antibiotic Resistance:
Ampicillin
Length:
10663 bp
Type:
CRISPR Plasmids
Replication origin:
ori
Source/Author:
Bassett AR, Tibbit C, Ponting CP, Liu JL.
Copy Number:
High copy number
Promoter:
Ac5

pAc-sgRNA-Cas9 vector Map

pAc-sgRNA-Cas910663 bp5001000150020002500300035004000450050005500600065007000750080008500900095001000010500polIII terminatorgRNA scaffolddU6-2 promoterAc5 promoterATG3xFLAGSV40 NLSCas9nucleoplasmin NLST2APuroRSV40 poly(A) signaloriAmpRAmpR promoter

Plasmid Protocol

1. Centrifuge at 5,000×g for 5 min.

2. Carefully open the tube and add 20 μl of sterile water to dissolve the DNA.

3. Close the tube and incubate for 10 minutes at room temperature.

4. Briefly vortex the tube and then do a quick spin to concentrate the liquid at the bottom. Speed is less than 5000×g.

5. Store the plasmid at -20 ℃.

6. The concentration of plasmid re-measurement sometimes differs from the nominal value, which may be due to the position of the lyophilized plasmid in the tube, the efficiency of the re-dissolution, the measurement bias, and adsorption on the wall of the tube, therefore, it is recommended to transform and extract the plasmid before using it

General Plasmid Transform Protocol

1. Take one 100μl of the competent cells and thaw it on ice for 10min, add 2μl of plasmid, then ice bath for 30min, then heat-shock it at 42℃ for 60s, do not stir, and then ice bath for 2min.

2. Add 900μl of LB liquid medium without antibiotics, and incubate at 37℃ for 45min (30℃ for 1-1.5 hours) with 180rpm shaking.

3. Centrifuge at 6000rpm for 5min, leave only 100μl of supernatant to resuspend the bacterial precipitate and spread it onto the target plasmid-resistant LB plate.

4. Invert the plate and incubate at 37℃ for 14h, or at 30℃ for 20h.

5. Pick a single colony into LB liquid medium, add the corresponding antibiotics, incubate at 220rpm for 14h, and extract the plasmid according to the experimental needs and the instructions of the plasmid extraction kit.

pAc-sgRNA-Cas9 vector Sequence

LOCUS       pAc-sgRNA-Cas9.       10663 bp DNA     circular SYN 01-JAN-1980
DEFINITION  Plasmid for expressing a single guide RNA (sgRNA) together with Cas9
            in Drosophila cells.
ACCESSION   .
VERSION     .
KEYWORDS    pAc-sgRNA-Cas9
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 10663)
  AUTHORS   Bassett AR, Tibbit C, Ponting CP, Liu JL.
  TITLE     Mutagenesis and homologous recombination in Drosophila cell lines 
            using CRISPR/Cas9.
  JOURNAL   Biol Open 2014;3:42-9.
  PUBMED    24326186
REFERENCE   2  (bases 1 to 10663)
  AUTHORS   Liu Lab / Addgene #49330
  TITLE     Direct Submission
REFERENCE   3  (bases 1 to 10663)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Biol Open";
            date: "2014"; volume: "3"; pages: "42-9"
COMMENT     SGRef: number: 2; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..10663
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     terminator      7..12
                     /note="polIII terminator"
                     /note="RNA polymerase III transcription terminator"
     misc_RNA        complement(13..88)
                     /label=gRNA scaffold
                     /note="guide RNA scaffold for the Streptococcus pyogenes 
                     CRISPR/Cas9 system"
     promoter        complement(107..506)
                     /label=dU6-2 promoter
                     /note="RNA polymerase III promoter for Drosophila U6-2
                     snRNA (Das et al., 1987)"
     promoter        507..2948
                     /label=Ac5 promoter
                     /note="Drosophila melanogaster actin 5c promoter"
     CDS             2989..2991
                     /codon_start=1
                     /product="start codon"
                     /label=start codon
                     /note="ATG"
                     /translation="M"
     CDS             2992..3057
                     /codon_start=1
                     /product="three tandem FLAG(R) epitope tags, followed by an
                     enterokinase cleavage site"
                     /label=three tandem FLAG
                     /note="3xFLAG"
                     /translation="DYKDHDGDYKDHDIDYKDDDDK"
     CDS             3064..3084
                     /codon_start=1
                     /product="nuclear localization signal of SV40 large T
                     antigen"
                     /note="SV40 NLS"
                     /translation="PKKKRKV"
     CDS             3109..7209
                     /label=Cas9
                     /note="Cas9 (Csn1) endonuclease from the Streptococcus
                     pyogenes Type II CRISPR/Cas system"
     CDS             7210..7257
                     /codon_start=1
                     /product="bipartite nuclear localization signal from
                     nucleoplasmin"
                     /label=bipartite nuclear localization signal from
                     nucl
                     /note="nucleoplasmin NLS"
                     /translation="KRPAATKKAGQAKKKK"
     CDS             7273..7326
                     /label=T2A
                     /note="2A peptide from Thosea asigna virus capsid protein"
     CDS             7351..7947
                     /label=PuroR
                     /note="puromycin N-acetyltransferase"
     polyA_signal    complement(7958..8092)
                     /label=SV40 poly(A) signal
                     /note="SV40 polyadenylation signal"
     rep_origin      complement(8714..9302)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     CDS             complement(9476..10333)
                     /label=AmpR
                     /note="beta-lactamase"
     promoter        complement(10334..10438)
                     /label=AmpR promoter