pDNR-LIB vector (V011722)

Basic Vector Information

Vector Name:
pDNR-LIB
Antibiotic Resistance:
Chloramphenicol
Length:
4161 bp
Type:
I.M.A.G.E. Consortium Plasmids
Replication origin:
ori
Source/Author:
Clontech
Copy Number:
High copy number
Promoter:
sacB
5' Primer:
M13 fwd
3' Primer:
M13 fwd

pDNR-LIB vector Map

pDNR-LIB4161 bp60012001800240030003600loxP recombination siteMCS A; multiple cloning siteSV40 poly(A) signallambda t0 terminatorCmRloxPSacBsacB promoteroriM13 fwdT7 promoter

pDNR-LIB vector Sequence

LOCUS       40924_14880        4161 bp DNA     circular SYN 17-DEC-2018
DEFINITION  Cloning vector pDNR-LIB, complete sequence.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 4161)
  AUTHORS   Kalnine N, Farmer A, Hsieh F, Zhang R.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUN-2006) Informatics, Clontech, 1290 Terra Bella 
            ave., Mountain View, CA 94043, USA
REFERENCE   2  (bases 1 to 4161)
  TITLE     Direct Submission
REFERENCE   3  (bases 1 to 4161)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Submitted 
            (02-JUN-2006) Informatics, Clontech, 1290 Terra Bella ave., Mountain
            View, CA 94043, USA"
COMMENT     SGRef: number: 2; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..4161
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     misc_feature    9..42
                     /label=loxP recombination site
                     /note="loxP recombination site"
     protein_bind    9..42
                     /label=loxP
                     /bound_moiety="Cre recombinase"
                     /note="Cre-mediated recombination occurs in the 8-bp core 
                     sequence (GCATACAT)."
     misc_feature    45..99
                     /note="MCS A; multiple cloning site"
     polyA_signal    162..296
                     /label=SV40 poly(A) signal
                     /note="SV40 polyadenylation signal"
     misc_feature    292..351
                     /note="MCS B; multiple cloning site"
     terminator      complement(415..509)
                     /label=lambda t0 terminator
                     /note="transcription terminator from phage lambda"
     CDS             complement(533..1189)
                     /label=CmR
                     /note="chloramphenicol acetyltransferase"
     protein_bind    complement(1218..1251)
                     /label=loxP
                     /note="Cre-mediated recombination occurs in the 8-bp core 
                     sequence (ATGTATGC) (Shaw et al., 2021)."
     CDS             complement(1305..2723)
                     /label=SacB
                     /note="secreted levansucrase that renders bacterial growth 
                     sensitive to sucrose"
     promoter        complement(2724..3169)
                     /label=sacB promoter
                     /note="sacB promoter and control region"
     rep_origin      3360..3948
                     /direction=RIGHT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     primer_bind     4065..4081
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     promoter        4089..4107
                     /label=T7 promoter
                     /note="promoter for bacteriophage T7 RNA polymerase"

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