pRKW2 vector (V011713)

Basic Vector Information

Vector Name:
pRKW2
Antibiotic Resistance:
Ampicillin
Length:
4750 bp
Type:
I.M.A.G.E. Consortium Plasmids
Replication origin:
ori
Source/Author:
I.M.A.G.E. Consortium
Copy Number:
High copy number
5' Primer:
M13 fwd
3' Primer:
M13 rev

pRKW2 vector Map

pRKW24750 bp600120018002400300036004200CMV enhancerCMV promoterSP6 promoterSK primerSV40 poly(A) signalSV40 promoterM13 fwdf1 oriAmpR promoterAmpRoriCAP binding sitelac promoterlac operatorM13 rev

pRKW2 vector Sequence

LOCUS       40924_37183        4750 bp DNA     circular SYN 18-DEC-2018
DEFINITION  Cloning vector pRKW2, complete sequence.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 4750)
  AUTHORS   Wu W, Niehrs C.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-MAY-2006) Division of Molecular Embryology (A050), 
            Deutsches Krebsforschungszetrum (DKFZ), Im Neuenheimer Feld 280, 
            Heidelberg 69120, Germany
REFERENCE   2  (bases 1 to 4750)
  TITLE     Direct Submission
REFERENCE   3  (bases 1 to 4750)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: "Submitted 
            (26-MAY-2006) Division of Molecular Embryology (A050), Deutsches 
            Krebsforschungszetrum (DKFZ), Im Neuenheimer Feld 280, Heidelberg 
            69120, Germany"
COMMENT     SGRef: number: 2; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..4750
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     enhancer        14..393
                     /label=CMV enhancer
                     /note="human cytomegalovirus immediate early enhancer"
     promoter        394..597
                     /label=CMV promoter
                     /note="human cytomegalovirus (CMV) immediate early
                     promoter"
     promoter        828..846
                     /label=SP6 promoter
                     /note="promoter for bacteriophage SP6 RNA polymerase"
     primer_bind     complement(956..972)
                     /label=SK primer
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     polyA_signal    1008..1142
                     /label=SV40 poly(A) signal
                     /note="SV40 polyadenylation signal"
     promoter        1215..1572
                     /label=SV40 promoter
                     /note="SV40 enhancer and early promoter"
     primer_bind     complement(1592..1608)
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     rep_origin      1821..2276
                     /label=f1 ori
                     /note="f1 bacteriophage origin of replication; arrow
                     indicates direction of (+) strand synthesis"
     promoter        2608..2712
                     /label=AmpR promoter
     CDS             2713..3570
                     /codon_start=1
                     /label=AmpR
                     /note="beta-lactamase"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
                     ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRDDAGQEQLGRRIHYSQNDLVEYS
                     PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
                     EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
                     LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
                     LIKHW"
     rep_origin      3744..4332
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     protein_bind    4620..4641
                     /label=CAP binding site
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     promoter        4656..4686
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    4694..4710
                     /label=lac operator
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     primer_bind     4718..4734
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"

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